Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 4B5    

Bonds between two atoms of the molecule

Total Number of Bonds: 103


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C45 C43 C C doub 1.38 N Y
2 C45 C46 C C sing 1.38 N Y
3 C43 C41 C C sing 1.38 N Y
4 C46 C44 C C doub 1.38 N Y
5 C41 C40 C C sing 1.51 N N
6 C41 C42 C C doub 1.38 N Y
7 C40 C06 C C sing 1.53 N N
8 C44 C42 C C sing 1.38 N Y
9 O47 C04 O C doub 1.21 N N
10 C29 C28 C C sing 1.53 N N
11 C04 N05 C N sing 1.35 N N
12 C04 O03 C O sing 1.35 N N
13 N05 C06 N C sing 1.46 N N
14 O03 C02 O C sing 1.45 N N
15 C06 C07 C C sing 1.53 N N
16 C30 C28 C C sing 1.53 N N
17 C28 C27 C C sing 1.53 N N
18 C01 C02 C C sing 1.53 N N
19 C02 C49 C C sing 1.53 N N
20 C02 C48 C C sing 1.53 N N
21 C07 C08 C C sing 1.53 N N
22 C07 O39 C O sing 1.43 N N
23 C08 C09 C C sing 1.53 N N
24 C27 C12 C C sing 1.53 N N
25 C12 N11 C N sing 1.46 N N
26 C12 C13 C C sing 1.51 N N
27 C24 C22 C C doub 1.38 N Y
28 C24 C25 C C sing 1.38 N Y
29 N11 C10 N C sing 1.35 N N
30 C36 C34 C C doub 1.38 N Y
31 C36 C38 C C sing 1.38 N Y
32 C22 C20 C C sing 1.38 N Y
33 C34 C33 C C sing 1.38 N Y
34 C25 C23 C C doub 1.38 N Y
35 C10 C09 C C sing 1.51 N N
36 C10 O31 C O doub 1.21 N N
37 C09 C32 C C sing 1.53 N N
38 N14 C13 N C sing 1.35 N N
39 N14 C15 N C sing 1.47 N N
40 C13 O26 C O doub 1.21 N N
41 C38 C37 C C doub 1.38 N Y
42 C33 C32 C C sing 1.51 N N
43 C33 C35 C C doub 1.38 N Y
44 C20 C19 C C sing 1.51 N N
45 C20 C21 C C doub 1.38 N Y
46 C15 C19 C C sing 1.53 N N
47 C15 C16 C C sing 1.51 N N
48 C23 C21 C C sing 1.38 N Y
49 C37 C35 C C sing 1.38 N Y
50 C16 N17 C N sing 1.35 N N
51 C16 O18 C O doub 1.21 N N
52 C30 H1 C H sing 1.09 N N
53 C30 H2 C H sing 1.09 N N
54 C30 H3 C H sing 1.09 N N
55 C29 H4 C H sing 1.09 N N
56 C29 H5 C H sing 1.09 N N
57 C29 H6 C H sing 1.09 N N
58 C28 H7 C H sing 1.09 N N
59 C22 H8 C H sing 1.08 N N
60 C23 H9 C H sing 1.08 N N
61 C24 H10 C H sing 1.08 N N
62 C21 H11 C H sing 1.08 N N
63 C15 H12 C H sing 1.09 N N
64 C12 H13 C H sing 1.09 N N
65 C09 H14 C H sing 1.09 N N
66 C08 H15 C H sing 1.09 N N
67 C08 H16 C H sing 1.09 N N
68 C07 H17 C H sing 1.09 N N
69 C06 H18 C H sing 1.09 N N
70 C01 H19 C H sing 1.09 N N
71 C01 H20 C H sing 1.09 N N
72 C01 H21 C H sing 1.09 N N
73 C19 H22 C H sing 1.09 N N
74 C19 H23 C H sing 1.09 N N
75 N05 H24 N H sing 0.97 N N
76 N11 H25 N H sing 0.97 N N
77 N14 H26 N H sing 0.97 N N
78 N17 H27 N H sing 0.97 N N
79 N17 H28 N H sing 0.97 N N
80 C25 H29 C H sing 1.08 N N
81 C27 H30 C H sing 1.09 N N
82 C27 H31 C H sing 1.09 N N
83 C32 H32 C H sing 1.09 N N
84 C32 H33 C H sing 1.09 N N
85 C34 H34 C H sing 1.08 N N
86 C35 H35 C H sing 1.08 N N
87 C36 H36 C H sing 1.08 N N
88 C37 H37 C H sing 1.08 N N
89 C38 H38 C H sing 1.08 N N
90 O39 H39 O H sing 0.97 N N
91 C40 H40 C H sing 1.09 N N
92 C40 H41 C H sing 1.09 N N
93 C42 H42 C H sing 1.08 N N
94 C43 H43 C H sing 1.08 N N
95 C44 H44 C H sing 1.08 N N
96 C45 H45 C H sing 1.08 N N
97 C46 H46 C H sing 1.08 N N
98 C48 H47 C H sing 1.09 N N
99 C48 H48 C H sing 1.09 N N
100 C48 H49 C H sing 1.09 N N
101 C49 H50 C H sing 1.09 N N
102 C49 H51 C H sing 1.09 N N
103 C49 H52 C H sing 1.09 N N