Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 4HV    

Bonds between two atoms of the molecule

Total Number of Bonds: 54


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 O2 C O sing 1.43 N N
2 C1 H1 C H sing 1.09 N N
3 C1 H1A C H sing 1.09 N N
4 C1 H1B C H sing 1.09 N N
5 O2 C3 O C sing 1.36 N N
6 C4 C3 C C doub 1.39 N Y
7 C3 C8 C C sing 1.39 N Y
8 C4 C5 C C sing 1.38 N Y
9 C4 H4 C H sing 1.08 N N
10 C5 C6 C C doub 1.4 N Y
11 C5 H5 C H sing 1.08 N N
12 C6 C11 C C sing 1.48 N N
13 C6 C7 C C sing 1.4 N Y
14 C8 C7 C C doub 1.38 N Y
15 C7 H7 C H sing 1.08 N N
16 C8 O9 C O sing 1.36 N N
17 C10 O9 C O sing 1.43 N N
18 C10 H10 C H sing 1.09 N N
19 C10 H10A C H sing 1.09 N N
20 C10 H10B C H sing 1.09 N N
21 C12 C11 C C doub 1.36 N Y
22 C11 O15 C O sing 1.35 N Y
23 C12 C13 C C sing 1.47 N Y
24 C12 H12 C H sing 1.08 N N
25 C16 C13 C C sing 1.47 N N
26 C13 C14 C C doub 1.37 N Y
27 O15 C14 O C sing 1.34 N Y
28 C14 H14 C H sing 1.08 N N
29 O17 C16 O C doub 1.22 N N
30 C16 N18 C N sing 1.35 N N
31 C19 N18 C N sing 1.47 N N
32 N18 HN18 N H sing 0.97 N N
33 H19 C19 H C sing 1.09 N N
34 C21 C19 C C sing 1.53 N N
35 C19 C30 C C sing 1.53 N N
36 C22 C21 C C sing 1.51 N N
37 C21 H21 C H sing 1.09 N N
38 C21 H21A C H sing 1.09 N N
39 C27 C22 C C doub 1.38 N Y
40 C22 C23 C C sing 1.38 N Y
41 C24 C23 C C doub 1.38 N Y
42 C23 H23 C H sing 1.08 N N
43 C25 C24 C C sing 1.38 N Y
44 C24 H24 C H sing 1.08 N N
45 C26 C25 C C doub 1.4 N Y
46 C25 H25 C H sing 1.08 N N
47 C28 C26 C C sing 1.43 N N
48 C26 C27 C C sing 1.4 N Y
49 C27 H27 C H sing 1.08 N N
50 N29 C28 N C trip 1.14 N N
51 O31 C30 O C sing 1.43 N N
52 C30 H30 C H sing 1.09 N N
53 C30 H30A C H sing 1.09 N N
54 O31 HO31 O H sing 0.97 N N