Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 5BF    

Bonds between two atoms of the molecule

Total Number of Bonds: 86


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C10 C09 C C sing 1.53 N N
2 C10 C11 C C sing 1.53 N N
3 O13 C12 O C sing 1.43 N N
4 O13 C14 O C sing 1.36 N N
5 C15 C16 C C doub 1.38 N Y
6 C15 C14 C C sing 1.39 N Y
7 C12 C11 C C sing 1.53 N N
8 C16 C19 C C sing 1.38 N Y
9 C14 C17 C C doub 1.39 N Y
10 C09 O08 C O sing 1.43 N N
11 O08 C07 O C sing 1.36 N N
12 C19 C20 C C sing 1.51 N N
13 C19 C18 C C doub 1.38 N Y
14 C17 C18 C C sing 1.38 N Y
15 C07 C01 C C doub 1.39 N Y
16 C07 C06 C C sing 1.39 N Y
17 C01 C02 C C sing 1.38 N Y
18 C20 C21 C C sing 1.53 N N
19 C21 C22 C C sing 1.51 N N
20 C06 C05 C C doub 1.38 N Y
21 C02 C03 C C doub 1.38 N Y
22 C26 C27 C C sing 1.39 N Y
23 C26 C24 C C doub 1.38 N Y
24 C27 C28 C C doub 1.38 N Y
25 C22 C24 C C sing 1.46 N N
26 C22 O23 C O doub 1.21 N N
27 C24 N25 C N sing 1.37 N Y
28 C05 C03 C C sing 1.38 N Y
29 C03 C04 C C sing 1.51 N N
30 C28 N25 C N sing 1.37 N Y
31 C28 C29 C C sing 1.47 N N
32 C04 C32 C C sing 1.53 N N
33 N31 C29 N C sing 1.36 N N
34 N31 C32 N C sing 1.46 N N
35 C29 O30 C O doub 1.22 N N
36 C32 C33 C C sing 1.51 N N
37 C33 O34 C O doub 1.21 N N
38 C33 N35 C N sing 1.35 N N
39 N35 C36 N C sing 1.46 N N
40 C36 C37 C C sing 1.51 N N
41 C36 C39 C C sing 1.53 N N
42 C37 O38 C O doub 1.21 N N
43 C39 C40 C C sing 1.51 N N
44 C45 C40 C C doub 1.38 N Y
45 C45 C44 C C sing 1.38 N Y
46 C40 C41 C C sing 1.38 N Y
47 C44 C43 C C doub 1.38 N Y
48 C43 C42 C C sing 1.38 N Y
49 C41 C42 C C doub 1.38 N Y
50 C01 H1 C H sing 1.08 N N
51 C02 H2 C H sing 1.08 N N
52 C04 H3 C H sing 1.09 N N
53 C04 H4 C H sing 1.09 N N
54 C05 H5 C H sing 1.08 N N
55 C06 H6 C H sing 1.08 N N
56 C09 H7 C H sing 1.09 N N
57 C09 H8 C H sing 1.09 N N
58 C10 H9 C H sing 1.09 N N
59 C10 H10 C H sing 1.09 N N
60 C11 H11 C H sing 1.09 N N
61 C11 H12 C H sing 1.09 N N
62 C12 H13 C H sing 1.09 N N
63 C12 H14 C H sing 1.09 N N
64 C15 H15 C H sing 1.08 N N
65 C16 H16 C H sing 1.08 N N
66 C17 H17 C H sing 1.08 N N
67 C18 H18 C H sing 1.08 N N
68 C20 H19 C H sing 1.09 N N
69 C20 H20 C H sing 1.09 N N
70 C21 H21 C H sing 1.09 N N
71 C21 H22 C H sing 1.09 N N
72 N25 H23 N H sing 0.97 N N
73 C26 H24 C H sing 1.08 N N
74 C27 H25 C H sing 1.08 N N
75 N31 H26 N H sing 0.97 N N
76 C32 H27 C H sing 1.09 N N
77 N35 H28 N H sing 0.97 N N
78 C36 H29 C H sing 1.09 N N
79 C37 H30 C H sing 1.08 N N
80 C39 H31 C H sing 1.09 N N
81 C39 H32 C H sing 1.09 N N
82 C41 H33 C H sing 1.08 N N
83 C42 H34 C H sing 1.08 N N
84 C43 H35 C H sing 1.08 N N
85 C44 H36 C H sing 1.08 N N
86 C45 H37 C H sing 1.08 N N