Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 5C9    

Bonds between two atoms of the molecule

Total Number of Bonds: 62


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C30 C29 C C sing 1.51 N N
2 C28 C29 C C doub 1.38 N Y
3 C28 C27 C C sing 1.38 N Y
4 C29 C31 C C sing 1.38 N Y
5 C27 C26 C C doub 1.38 N Y
6 C31 C25 C C doub 1.39 N Y
7 C26 C25 C C sing 1.39 N Y
8 C25 N24 C N sing 1.4 N N
9 C22 C21 C C doub 1.38 N Y
10 C22 C23 C C sing 1.39 N Y
11 C21 C20 C C sing 1.38 N Y
12 N24 C23 N C sing 1.4 N N
13 C23 C32 C C doub 1.39 N Y
14 C20 C19 C C doub 1.4 N Y
15 C32 C19 C C sing 1.4 N Y
16 C19 C03 C C sing 1.47 N N
17 C01 C02 C C sing 1.53 N N
18 O09 C08 O C sing 1.36 N N
19 C03 C02 C C sing 1.51 N N
20 C03 C04 C C doub 1.36 N N
21 C08 C07 C C doub 1.39 N Y
22 C08 C10 C C sing 1.39 N Y
23 C07 C06 C C sing 1.38 N Y
24 C10 C11 C C doub 1.38 N Y
25 C06 C05 C C doub 1.4 N Y
26 C11 C05 C C sing 1.4 N Y
27 C05 C04 C C sing 1.48 N N
28 C04 C12 C C sing 1.48 N N
29 C13 C12 C C doub 1.4 N Y
30 C13 C14 C C sing 1.38 N Y
31 C12 C18 C C sing 1.4 N Y
32 C14 C15 C C doub 1.39 N Y
33 C18 C17 C C doub 1.38 N Y
34 C15 C17 C C sing 1.39 N Y
35 C15 O16 C O sing 1.36 N N
36 C01 H1 C H sing 1.09 N N
37 C01 H2 C H sing 1.09 N N
38 C01 H3 C H sing 1.09 N N
39 C02 H4 C H sing 1.09 N N
40 C02 H5 C H sing 1.09 N N
41 C06 H8 C H sing 1.08 N N
42 C07 H9 C H sing 1.08 N N
43 O09 H10 O H sing 0.97 N N
44 C10 H11 C H sing 1.08 N N
45 C11 H12 C H sing 1.08 N N
46 C13 H13 C H sing 1.08 N N
47 C14 H14 C H sing 1.08 N N
48 O16 H15 O H sing 0.97 N N
49 C17 H16 C H sing 1.08 N N
50 C18 H17 C H sing 1.08 N N
51 C20 H18 C H sing 1.08 N N
52 C21 H19 C H sing 1.08 N N
53 C22 H20 C H sing 1.08 N N
54 N24 H21 N H sing 0.97 N N
55 C26 H22 C H sing 1.08 N N
56 C27 H23 C H sing 1.08 N N
57 C28 H24 C H sing 1.08 N N
58 C30 H25 C H sing 1.09 N N
59 C30 H26 C H sing 1.09 N N
60 C30 H27 C H sing 1.09 N N
61 C31 H28 C H sing 1.08 N N
62 C32 H29 C H sing 1.08 N N