Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 5CB    

Bonds between two atoms of the molecule

Total Number of Bonds: 58


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O1 C20 O C sing 1.43 N N
2 O1 H1 O H sing 0.97 N N
3 CL2 C6 CL C sing 1.74 N N
4 CL3 C17 CL C sing 1.8 N N
5 C4 C5 C C sing 1.38 N Y
6 C4 C6 C C doub 1.39 N Y
7 C4 H4 C H sing 1.08 N N
8 C5 C7 C C doub 1.38 N Y
9 C5 H5 C H sing 1.08 N N
10 C6 C8 C C sing 1.37 N Y
11 C7 C9 C C sing 1.41 N Y
12 C7 S10 C S sing 1.77 N Y
13 C8 C9 C C doub 1.42 N Y
14 C8 H8 C H sing 1.08 N N
15 C9 C12 C C sing 1.46 N Y
16 S10 C11 S C sing 1.78 N Y
17 C11 C12 C C doub 1.34 N Y
18 C11 H11 C H sing 1.08 N N
19 C12 C13 C C sing 1.51 N N
20 C13 N14 C N sing 1.46 N N
21 C13 H131 C H sing 1.09 N N
22 C13 H132 C H sing 1.09 N N
23 N14 C15 N C sing 1.35 N N
24 N14 H14 N H sing 0.97 N N
25 C15 C16 C C sing 1.51 N N
26 C15 O32 C O doub 1.21 N N
27 C16 N18 C N sing 1.47 N N
28 C16 H161 C H sing 1.09 N N
29 C16 H162 C H sing 1.09 N N
30 C17 N18 C N sing 1.47 N N
31 C17 C19 C C sing 1.53 N N
32 C17 H117 C H sing 1.09 N N
33 N18 C20 N C sing 1.47 N N
34 C19 N21 C N sing 1.46 N N
35 C19 H19 C H sing 1.09 N N
36 C19 H191 C H sing 1.09 N N
37 C20 C22 C C sing 1.5 N N
38 C20 H220 C H sing 1.09 N N
39 N21 C22 N C doub 1.28 N N
40 C22 N23 C N sing 1.37 N N
41 N23 C24 N C sing 1.46 N N
42 N23 H23 N H sing 0.97 N N
43 C24 C25 C C sing 1.53 N N
44 C24 H241 C H sing 1.09 N N
45 C24 H242 C H sing 1.09 N N
46 C25 C27 C C sing 1.51 N N
47 C25 H251 C H sing 1.09 N N
48 C25 H252 C H sing 1.09 N N
49 C26 C27 C C sing 1.38 N Y
50 C26 C28 C C doub 1.39 N Y
51 C26 H26 C H sing 1.08 N N
52 C27 N29 C N doub 1.32 N Y
53 C28 C30 C C sing 1.39 N Y
54 C28 H28 C H sing 1.08 N N
55 N29 C31 N C sing 1.32 N Y
56 C30 C31 C C doub 1.38 N Y
57 C30 H30 C H sing 1.08 N N
58 C31 H31 C H sing 1.08 N N