Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 5LK    

Bonds between two atoms of the molecule

Total Number of Bonds: 60


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 C6 N C sing 1.37 N Y
2 N1 C11 N C sing 1.47 N N
3 N2 N1 N N sing 1.39 N Y
4 C3 N2 C N doub 1.31 N Y
5 C3 C5 C C sing 1.41 N Y
6 C3 H3 C H sing 1.08 N N
7 C5 C6 C C doub 1.38 N Y
8 C5 C27 C C sing 1.48 N Y
9 C6 N7 C N sing 1.36 N N
10 N7 C8 N C doub 1.3 N N
11 C8 H8 C H sing 1.08 N N
12 C10 C8 C C sing 1.5 N N
13 C10 C15 C C sing 1.51 N N
14 C10 H10 C H sing 1.09 N N
15 C11 C10 C C sing 1.53 N N
16 N12 C11 N C sing 1.47 N N
17 N12 HN12 N H sing 1.01 N N
18 C15 C16 C C sing 1.38 N Y
19 C16 C18 C C doub 1.38 N Y
20 C16 H16 C H sing 1.08 N N
21 C18 H18 C H sing 1.08 N N
22 C20 C18 C C sing 1.39 N Y
23 C20 O25 C O sing 1.36 N N
24 C21 C20 C C doub 1.39 N Y
25 C21 H21 C H sing 1.08 N N
26 C23 C15 C C doub 1.38 N Y
27 C23 C21 C C sing 1.38 N Y
28 C23 H23 C H sing 1.08 N N
29 O25 HO25 O H sing 0.97 N N
30 C27 C35 C C sing 1.39 N Y
31 C28 C27 C C doub 1.39 N Y
32 C28 C30 C C sing 1.39 N Y
33 C28 H28 C H sing 1.08 N N
34 C30 C31 C C doub 1.39 N Y
35 C31 C33 C C sing 1.38 N Y
36 C31 H31 C H sing 1.08 N N
37 C33 H33 C H sing 1.08 N N
38 C35 C33 C C doub 1.38 N Y
39 C35 H35 C H sing 1.08 N N
40 N37 C30 N C sing 1.4 N N
41 C38 N37 C N sing 1.47 N N
42 C38 H38 C H sing 1.09 N N
43 C38 H38A C H sing 1.09 N N
44 C41 C38 C C sing 1.53 N N
45 C41 H41 C H sing 1.09 N N
46 C41 H41A C H sing 1.09 N N
47 N44 C41 N C sing 1.47 N N
48 N44 C45 N C sing 1.47 N N
49 C45 C48 C C sing 1.53 N N
50 C45 H45 C H sing 1.09 N N
51 C45 H45A C H sing 1.09 N N
52 C48 N37 C N sing 1.47 N N
53 C48 H48 C H sing 1.09 N N
54 C48 H48A C H sing 1.09 N N
55 C51 N44 C N sing 1.47 N N
56 C51 H51 C H sing 1.09 N N
57 C51 H51A C H sing 1.09 N N
58 C51 H51B C H sing 1.09 N N
59 C11 H25 C H sing 1.09 N N
60 N12 H26 N H sing 1.01 N N