Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 5X3    

Bonds between two atoms of the molecule

Total Number of Bonds: 76


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C38 C37 C C sing 1.51 N N
2 O01 C02 O C doub 1.22 N N
3 C37 C36 C C doub 1.38 N Y
4 C37 C39 C C sing 1.38 N Y
5 C36 C32 C C sing 1.39 N Y
6 C02 O44 C O sing 1.35 N N
7 C02 C03 C C sing 1.46 N N
8 C04 C03 C C doub 1.37 N Y
9 C04 C05 C C sing 1.4 N Y
10 C39 CL C CL sing 1.74 N N
11 C39 C34 C C doub 1.38 N Y
12 C32 O31 C O sing 1.36 N N
13 C32 C33 C C doub 1.39 N Y
14 O31 C30 O C sing 1.43 N N
15 C03 O43 C O sing 1.35 N Y
16 C28 C29 C C sing 1.53 N N
17 C28 C27 C C sing 1.51 N N
18 C05 C06 C C doub 1.35 N Y
19 C34 C33 C C sing 1.38 N Y
20 C34 C35 C C sing 1.51 N N
21 O43 C06 O C sing 1.34 N Y
22 C29 C30 C C sing 1.53 N N
23 C15 C16 C C doub 1.36 N Y
24 C15 C14 C C sing 1.4 N Y
25 C27 C14 C C sing 1.42 N Y
26 C27 C11 C C doub 1.36 N Y
27 C06 S07 C S sing 1.76 N N
28 C16 C17 C C sing 1.39 N Y
29 C14 C13 C C doub 1.41 N Y
30 O41 C10 O C doub 1.22 N N
31 C11 C10 C C sing 1.47 N N
32 C11 N12 C N sing 1.38 N Y
33 C10 N09 C N sing 1.35 N N
34 C22 C21 C C sing 1.51 N N
35 C17 C19 C C doub 1.39 N Y
36 C17 CL2 C CL sing 1.74 N N
37 C13 N12 C N sing 1.37 N Y
38 C13 C19 C C sing 1.4 N Y
39 N09 S07 N S sing 1.66 N N
40 S07 O42 S O doub 1.42 N N
41 S07 O08 S O doub 1.42 N N
42 C19 C20 C C sing 1.48 N N
43 C21 C20 C C doub 1.36 N Y
44 C21 N23 C N sing 1.35 N Y
45 C20 C25 C C sing 1.41 N Y
46 N23 N24 N N sing 1.4 N Y
47 C25 N24 C N doub 1.31 N Y
48 C25 C26 C C sing 1.51 N N
49 N12 H1 N H sing 0.97 N N
50 C15 H2 C H sing 1.08 N N
51 C22 H3 C H sing 1.09 N N
52 C22 H4 C H sing 1.09 N N
53 C22 H5 C H sing 1.09 N N
54 C26 H6 C H sing 1.09 N N
55 C26 H7 C H sing 1.09 N N
56 C26 H8 C H sing 1.09 N N
57 C28 H9 C H sing 1.09 N N
58 C28 H10 C H sing 1.09 N N
59 C04 H11 C H sing 1.08 N N
60 C05 H12 C H sing 1.08 N N
61 N09 H13 N H sing 0.97 N N
62 C16 H14 C H sing 1.08 N N
63 N23 H15 N H sing 0.97 N N
64 C29 H16 C H sing 1.09 N N
65 C29 H17 C H sing 1.09 N N
66 C30 H18 C H sing 1.09 N N
67 C30 H19 C H sing 1.09 N N
68 C33 H20 C H sing 1.08 N N
69 C35 H21 C H sing 1.09 N N
70 C35 H22 C H sing 1.09 N N
71 C35 H23 C H sing 1.09 N N
72 C36 H24 C H sing 1.08 N N
73 C38 H25 C H sing 1.09 N N
74 C38 H26 C H sing 1.09 N N
75 C38 H27 C H sing 1.09 N N
76 O44 H28 O H sing 0.97 N N