Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 5ZG    

Bonds between two atoms of the molecule

Total Number of Bonds: 29


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O3 P O P doub 1.48 N N
2 O2 P O P sing 1.61 N N
3 P O1 P O sing 1.61 N N
4 P C7 P C sing 1.82 N N
5 C9 O1 C O sing 1.43 N N
6 C9 C10 C C sing 1.53 N N
7 C7 C1 C C sing 1.51 N N
8 C2 C1 C C doub 1.38 N Y
9 C2 C3 C C sing 1.38 N Y
10 C1 C6 C C sing 1.38 N Y
11 C3 C4 C C doub 1.38 N Y
12 C6 C5 C C doub 1.38 N Y
13 C4 C5 C C sing 1.38 N Y
14 C4 C8 C C sing 1.51 N N
15 C2 H1 C H sing 1.08 N N
16 C3 H2 C H sing 1.08 N N
17 C5 H3 C H sing 1.08 N N
18 C6 H4 C H sing 1.08 N N
19 C7 H5 C H sing 1.09 N N
20 C7 H6 C H sing 1.09 N N
21 C8 H7 C H sing 1.09 N N
22 C8 H8 C H sing 1.09 N N
23 C8 H9 C H sing 1.09 N N
24 C9 H10 C H sing 1.09 N N
25 C9 H11 C H sing 1.09 N N
26 C10 H12 C H sing 1.09 N N
27 C10 H13 C H sing 1.09 N N
28 C10 H14 C H sing 1.09 N N
29 O2 H15 O H sing 0.97 N N