Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 6XF    

Bonds between two atoms of the molecule

Total Number of Bonds: 54


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CAO CAU C C sing 1.51 N N
2 CAO CAV C C sing 1.51 N N
3 CAB CBB C C sing 1.53 N N
4 CAG CAV C C doub 1.38 N Y
5 CAG CAM C C sing 1.38 N Y
6 OAD CAU O C doub 1.21 N N
7 CAU NBC C N sing 1.35 N N
8 CAV CAH C C sing 1.38 N Y
9 CAM CAY C C doub 1.38 N Y
10 NBC CBB N C sing 1.46 N N
11 NBC CAP N C sing 1.47 N N
12 CBB CAC C C sing 1.53 N N
13 CAH CAN C C doub 1.38 N Y
14 CAP CAZ C C sing 1.51 N N
15 CAY CAN C C sing 1.38 N Y
16 CAY NBD C N sing 1.48 N N
17 NBD OAF N O sing 1.22 N N
18 NBD OAE N O doub 1.22 N N
19 CAZ OAT C O sing 1.34 N Y
20 CAZ NAR C N doub 1.31 N Y
21 OAT NAQ O N sing 1.21 N Y
22 NAR CBA N C sing 1.35 N Y
23 NAQ CBA N C doub 1.31 N Y
24 CBA CAX C C sing 1.48 N N
25 CAX CAK C C doub 1.39 N Y
26 CAX CAL C C sing 1.39 N Y
27 CAK CAI C C sing 1.38 N Y
28 CAL CAJ C C doub 1.38 N Y
29 CAI CAW C C doub 1.39 N Y
30 CAJ CAW C C sing 1.39 N Y
31 CAW OAS C O sing 1.36 N N
32 OAS CAA O C sing 1.43 N N
33 CAA H1 C H sing 1.09 N N
34 CAA H2 C H sing 1.09 N N
35 CAA H3 C H sing 1.09 N N
36 CAJ H4 C H sing 1.08 N N
37 CAL H5 C H sing 1.08 N N
38 CAI H6 C H sing 1.08 N N
39 CAK H7 C H sing 1.08 N N
40 CAP H8 C H sing 1.09 N N
41 CAP H9 C H sing 1.09 N N
42 CBB H10 C H sing 1.09 N N
43 CAC H11 C H sing 1.09 N N
44 CAC H12 C H sing 1.09 N N
45 CAC H13 C H sing 1.09 N N
46 CAB H14 C H sing 1.09 N N
47 CAB H15 C H sing 1.09 N N
48 CAB H16 C H sing 1.09 N N
49 CAO H17 C H sing 1.09 N N
50 CAO H18 C H sing 1.09 N N
51 CAG H19 C H sing 1.08 N N
52 CAM H20 C H sing 1.08 N N
53 CAN H21 C H sing 1.08 N N
54 CAH H22 C H sing 1.08 N N