Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 6XO    

Bonds between two atoms of the molecule

Total Number of Bonds: 74


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C6 C5 C C doub 1.38 N Y
2 C6 C1 C C sing 1.38 N Y
3 C5 C4 C C sing 1.38 N Y
4 C1 C2 C C doub 1.38 N Y
5 C4 C7 C C sing 1.51 N N
6 C4 C3 C C doub 1.38 N Y
7 C2 C3 C C sing 1.38 N Y
8 C7 O8 C O sing 1.45 N N
9 O8 C9 O C sing 1.35 N N
10 C9 O18 C O doub 1.21 N N
11 C9 N10 C N sing 1.35 N N
12 N10 C11 N C sing 1.47 N N
13 C11 P12 C P sing 1.82 N N
14 O20 P12 O P doub 1.48 N N
15 O19 P12 O P sing 1.61 N N
16 P12 N13 P N sing 1.68 N N
17 O34 C33 O C doub 1.21 N N
18 O35 C33 O C sing 1.34 N N
19 C33 C17 C C sing 1.51 N N
20 N13 C14 N C sing 1.47 N N
21 C17 N16 C N sing 1.47 N N
22 C17 C26 C C sing 1.53 N N
23 N16 C15 N C sing 1.35 N N
24 C15 O25 C O doub 1.21 N N
25 C15 C14 C C sing 1.51 N N
26 C14 C21 C C sing 1.53 N N
27 C28 C29 C C sing 1.53 N N
28 C28 C27 C C sing 1.53 N N
29 C29 C30 C C sing 1.53 N N
30 C26 C27 C C sing 1.53 N N
31 C27 C32 C C sing 1.53 N N
32 C21 C22 C C sing 1.53 N N
33 C30 C31 C C sing 1.53 N N
34 C23 C22 C C sing 1.53 N N
35 C22 C24 C C sing 1.53 N N
36 C32 C31 C C sing 1.53 N N
37 C1 H1 C H sing 1.08 N N
38 C2 H2 C H sing 1.08 N N
39 C3 H3 C H sing 1.08 N N
40 C7 H4 C H sing 1.09 N N
41 C7 H5 C H sing 1.09 N N
42 C11 H6 C H sing 1.09 N N
43 C11 H7 C H sing 1.09 N N
44 C14 H8 C H sing 1.09 N N
45 C21 H9 C H sing 1.09 N N
46 C21 H10 C H sing 1.09 N N
47 C22 H11 C H sing 1.09 N N
48 C24 H12 C H sing 1.09 N N
49 C24 H13 C H sing 1.09 N N
50 C24 H14 C H sing 1.09 N N
51 C27 H15 C H sing 1.09 N N
52 C30 H16 C H sing 1.09 N N
53 C30 H17 C H sing 1.09 N N
54 C31 H18 C H sing 1.09 N N
55 C31 H19 C H sing 1.09 N N
56 C32 H20 C H sing 1.09 N N
57 C32 H21 C H sing 1.09 N N
58 O19 H22 O H sing 0.97 N N
59 N13 H23 N H sing 1.01 N N
60 C23 H24 C H sing 1.09 N N
61 C23 H25 C H sing 1.09 N N
62 C23 H26 C H sing 1.09 N N
63 N16 H27 N H sing 0.97 N N
64 C17 H28 C H sing 1.09 N N
65 O35 H29 O H sing 0.97 N N
66 C26 H30 C H sing 1.09 N N
67 C26 H31 C H sing 1.09 N N
68 C29 H32 C H sing 1.09 N N
69 C29 H33 C H sing 1.09 N N
70 C28 H34 C H sing 1.09 N N
71 C28 H35 C H sing 1.09 N N
72 C5 H36 C H sing 1.08 N N
73 C6 H37 C H sing 1.08 N N
74 N10 H38 N H sing 0.97 N N