Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 6YL    

Bonds between two atoms of the molecule

Total Number of Bonds: 55


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C21 N20 C N sing 1.46 N N
2 C29 N26 C N sing 1.47 N N
3 N20 C22 N C sing 1.46 N N
4 N20 C17 N C sing 1.35 N N
5 O19 C17 O C doub 1.21 N N
6 N26 N25 N N sing 1.4 N Y
7 N26 C27 N C sing 1.35 N Y
8 N25 C24 N C doub 1.31 N Y
9 C17 C10 C C sing 1.48 N N
10 C27 C23 C C doub 1.36 N Y
11 C24 C28 C C sing 1.51 N N
12 C24 C23 C C sing 1.41 N Y
13 C23 C5 C C sing 1.49 N N
14 C10 C11 C C doub 1.4 N Y
15 C10 C9 C C sing 1.4 N Y
16 C15 C8 C C sing 1.53 N N
17 C8 C9 C C sing 1.51 N N
18 C8 O7 C O sing 1.43 N N
19 C6 C5 C C doub 1.4 N Y
20 C6 C1 C C sing 1.39 N Y
21 C5 C4 C C sing 1.39 N Y
22 C11 C12 C C sing 1.38 N Y
23 C9 C14 C C doub 1.38 N Y
24 O7 C1 O C sing 1.36 N N
25 C1 C2 C C doub 1.4 N Y
26 C4 N3 C N doub 1.32 N Y
27 C2 N3 C N sing 1.32 N Y
28 C2 N18 C N sing 1.39 N N
29 C12 C13 C C doub 1.39 N Y
30 C14 C13 C C sing 1.39 N Y
31 C13 F16 C F sing 1.35 N N
32 C11 H1 C H sing 1.08 N N
33 C12 H2 C H sing 1.08 N N
34 C6 H3 C H sing 1.08 N N
35 C14 H4 C H sing 1.08 N N
36 C4 H5 C H sing 1.08 N N
37 C27 H6 C H sing 1.08 N N
38 C28 H7 C H sing 1.09 N N
39 C28 H8 C H sing 1.09 N N
40 C28 H9 C H sing 1.09 N N
41 C15 H10 C H sing 1.09 N N
42 C15 H11 C H sing 1.09 N N
43 C15 H12 C H sing 1.09 N N
44 C29 H13 C H sing 1.09 N N
45 C29 H14 C H sing 1.09 N N
46 C29 H15 C H sing 1.09 N N
47 C21 H16 C H sing 1.09 N N
48 C21 H17 C H sing 1.09 N N
49 C21 H18 C H sing 1.09 N N
50 C22 H19 C H sing 1.09 N N
51 C22 H20 C H sing 1.09 N N
52 C22 H21 C H sing 1.09 N N
53 C8 H22 C H sing 1.09 N N
54 N18 H23 N H sing 0.97 N N
55 N18 H24 N H sing 0.97 N N