Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 750    

Bonds between two atoms of the molecule

Total Number of Bonds: 104


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 O2 C O sing 1.43 N N
2 C1 C6 C C sing 1.53 N N
3 C1 HC11 C H sing 1.09 N N
4 C1 HC12 C H sing 1.09 N N
5 O2 C3 O C sing 1.43 N N
6 C3 C4 C C sing 1.53 N N
7 C3 HC31 C H sing 1.09 N N
8 C3 HC32 C H sing 1.09 N N
9 C4 N5 C N sing 1.47 N N
10 C4 HC41 C H sing 1.09 N N
11 C4 HC42 C H sing 1.09 N N
12 N5 C6 N C sing 1.47 N N
13 N5 C7 N C sing 1.47 N N
14 C6 HC61 C H sing 1.09 N N
15 C6 HC62 C H sing 1.09 N N
16 C7 C8 C C sing 1.53 N N
17 C7 HC71 C H sing 1.09 N N
18 C7 HC72 C H sing 1.09 N N
19 C8 O9 C O sing 1.43 N N
20 C8 HC81 C H sing 1.09 N N
21 C8 HC82 C H sing 1.09 N N
22 O9 C10 O C sing 1.36 N N
23 C10 C11 C C doub 1.38 N Y
24 C10 C15 C C sing 1.39 N Y
25 C11 C12 C C sing 1.4 N Y
26 C11 H11 C H sing 1.08 N N
27 C12 C13 C C doub 1.41 N Y
28 C12 C16 C C sing 1.46 N Y
29 C13 C14 C C sing 1.39 N Y
30 C13 O18 C O sing 1.35 N Y
31 C14 C15 C C doub 1.38 N Y
32 C14 H14 C H sing 1.08 N N
33 C15 H15 C H sing 1.08 N N
34 C16 C17 C C doub 1.36 N Y
35 C16 H16 C H sing 1.08 N N
36 C17 O18 C O sing 1.35 N Y
37 C17 C19 C C sing 1.47 N N
38 C19 O20 C O doub 1.22 N N
39 C19 N21 C N sing 1.35 N N
40 N21 C22 N C sing 1.46 N N
41 N21 H21 N H sing 0.97 N N
42 C22 C23 C C sing 1.53 N N
43 C22 C27 C C sing 1.51 N N
44 C22 H22 C H sing 1.09 N N
45 C23 C24 C C sing 1.53 N N
46 C23 H231 C H sing 1.09 N N
47 C23 H232 C H sing 1.09 N N
48 C24 C25 C C sing 1.53 N N
49 C24 C26 C C sing 1.53 N N
50 C24 H24 C H sing 1.09 N N
51 C25 H251 C H sing 1.09 N N
52 C25 H252 C H sing 1.09 N N
53 C25 H253 C H sing 1.09 N N
54 C26 H261 C H sing 1.09 N N
55 C26 H262 C H sing 1.09 N N
56 C26 H263 C H sing 1.09 N N
57 C27 O28 C O doub 1.21 N N
58 C27 N29 C N sing 1.35 N N
59 N29 C30 N C sing 1.47 N N
60 N29 H29 N H sing 0.97 N N
61 C30 C37 C C sing 1.53 N N
62 C30 C31 C C sing 1.49 N N
63 C30 H30 C H sing 1.09 N N
64 O32 C31 O C doub 1.21 N N
65 C33 N34 C N sing 1.48 N N
66 C33 C31 C C sing 1.52 N N
67 C33 H331 C H sing 1.09 N N
68 C33 H332 C H sing 1.09 N N
69 N34 C35 N C sing 1.44 N N
70 N34 C38 N C sing 1.35 N N
71 C35 C36 C C sing 1.53 N N
72 C35 H351 C H sing 1.09 N N
73 C35 H352 C H sing 1.09 N N
74 C36 C37 C C sing 1.48 N N
75 C36 H361 C H sing 1.09 N N
76 C36 H362 C H sing 1.09 N N
77 C37 H371 C H sing 1.09 N N
78 C37 H372 C H sing 1.09 N N
79 C38 O39 C O doub 1.21 N N
80 C38 C40 C C sing 1.51 N N
81 C40 C41 C C sing 1.51 N N
82 C40 H401 C H sing 1.09 N N
83 C40 H402 C H sing 1.09 N N
84 C41 C42 C C doub 1.38 N Y
85 C41 C46 C C sing 1.38 N Y
86 C42 C43 C C sing 1.38 N Y
87 C42 H42 C H sing 1.08 N N
88 C43 C44 C C doub 1.38 N Y
89 C43 H43 C H sing 1.08 N N
90 C44 C45 C C sing 1.39 N Y
91 C44 H44 C H sing 1.08 N N
92 C45 C46 C C doub 1.39 N Y
93 C45 C47 C C sing 1.48 N Y
94 C46 H46 C H sing 1.08 N N
95 C47 C48 C C doub 1.39 N Y
96 C47 N52 C N sing 1.33 N Y
97 C48 C49 C C sing 1.38 N Y
98 C48 H48 C H sing 1.08 N N
99 C49 C50 C C doub 1.39 N Y
100 C49 H49 C H sing 1.08 N N
101 C50 C51 C C sing 1.38 N Y
102 C50 H50 C H sing 1.08 N N
103 C51 N52 C N doub 1.32 N Y
104 C51 H51 C H sing 1.08 N N