Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 80U    

Bonds between two atoms of the molecule

Total Number of Bonds: 64


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CAO CAP C C doub 1.33 N N
2 CAP CBB C C sing 1.47 N N
3 OAE CBB O C doub 1.22 N N
4 CBB NBM C N sing 1.35 N N
5 C2 N3 C N doub 1.31 N Y
6 C2 N1 C N sing 1.32 N Y
7 N3 C4 N C sing 1.33 N Y
8 NBM CAU N C sing 1.47 N N
9 NBM CAR N C sing 1.47 N N
10 CAU CBL C C sing 1.53 N N
11 N1 C6 N C doub 1.33 N Y
12 CBL NBO C N sing 1.46 N N
13 CBL CAQ C C sing 1.53 N N
14 C4 NBO C N sing 1.36 N Y
15 C4 C5 C C doub 1.41 N Y
16 NBO NAY N N sing 1.4 N Y
17 C6 C5 C C sing 1.4 N Y
18 C6 NAB C N sing 1.38 N N
19 CAR CAN C C sing 1.53 N N
20 C5 CBH C C sing 1.46 N Y
21 CAN CAQ C C sing 1.53 N N
22 NAY CBH N C doub 1.31 N Y
23 CBH CBE C C sing 1.48 N N
24 CAH NAW C N sing 1.34 N Y
25 CAH CAL C C doub 1.35 N Y
26 CAJ CBE C C doub 1.39 N Y
27 CAJ CAK C C sing 1.38 N Y
28 NAW CBG N C doub 1.3 N Y
29 CBE CAM C C sing 1.4 N Y
30 CAL NBN C N sing 1.37 N Y
31 CAK CBF C C doub 1.39 N Y
32 CBG NBN C N sing 1.35 N Y
33 CBG CAS C C sing 1.51 N N
34 CAM CBD C C doub 1.38 N Y
35 NBN CAA N C sing 1.46 N N
36 CBF CBD C C sing 1.39 N Y
37 CBF OAZ C O sing 1.36 N N
38 CBD CLA C CL sing 1.74 N N
39 CAS OAZ C O sing 1.43 N N
40 C2 H1 C H sing 1.08 N N
41 CAA H2 C H sing 1.09 N N
42 CAA H3 C H sing 1.09 N N
43 CAA H4 C H sing 1.09 N N
44 CAH H5 C H sing 1.08 N N
45 CAJ H6 C H sing 1.08 N N
46 CAK H7 C H sing 1.08 N N
47 CAL H8 C H sing 1.08 N N
48 CAM H9 C H sing 1.08 N N
49 CAN H10 C H sing 1.09 N N
50 CAN H11 C H sing 1.09 N N
51 CAO H12 C H sing 1.08 N N
52 CAO H13 C H sing 1.08 N N
53 CAP H15 C H sing 1.08 N N
54 CAQ H17 C H sing 1.09 N N
55 CAQ H18 C H sing 1.09 N N
56 CAR H19 C H sing 1.09 N N
57 CAR H20 C H sing 1.09 N N
58 CAS H21 C H sing 1.09 N N
59 CAS H22 C H sing 1.09 N N
60 CAU H23 C H sing 1.09 N N
61 CAU H24 C H sing 1.09 N N
62 CBL H25 C H sing 1.09 N N
63 NAB H26 N H sing 0.97 N N
64 NAB H27 N H sing 0.97 N N