Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 82J    

Bonds between two atoms of the molecule

Total Number of Bonds: 81


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C40 C38 C C sing 1.53 N N
2 O41 S36 O S doub 1.42 N N
3 C38 S36 C S sing 1.81 N N
4 C38 C39 C C sing 1.53 N N
5 C20 C21 C C doub 1.38 N Y
6 C20 C19 C C sing 1.38 N Y
7 S36 C19 S C sing 1.76 N N
8 S36 O37 S O doub 1.42 N N
9 C21 C22 C C sing 1.39 N Y
10 C19 C18 C C doub 1.39 N Y
11 C22 N24 C N sing 1.4 N N
12 C22 C23 C C doub 1.39 N Y
13 C18 C23 C C sing 1.38 N Y
14 C18 C17 C C sing 1.51 N N
15 N24 C26 N C sing 1.35 N N
16 C30 C34 C C sing 1.53 N N
17 C30 C13 C C sing 1.51 N N
18 C17 N16 C N sing 1.48 N N
19 O15 C9 O C doub 1.22 N N
20 C26 O27 C O sing 1.35 N N
21 C26 O28 C O doub 1.21 N N
22 O27 C29 O C sing 1.44 N N
23 C13 C14 C C doub 1.39 N Y
24 C13 C12 C C sing 1.38 N Y
25 C9 N16 C N sing 1.37 N N
26 C9 C8 C C sing 1.51 N N
27 C14 C42 C C sing 1.38 N Y
28 N16 C35 N C sing 1.47 N N
29 C29 C25 C C sing 1.53 N N
30 C25 C12 C C sing 1.5 N N
31 C12 C11 C C doub 1.39 N Y
32 N7 C8 N C sing 1.47 N N
33 N7 C4 N C sing 1.4 N N
34 C8 C42 C C sing 1.51 N N
35 C42 C10 C C doub 1.38 N Y
36 C5 C4 C C doub 1.39 N Y
37 C5 C6 C C sing 1.38 N Y
38 C4 C3 C C sing 1.39 N Y
39 C11 C10 C C sing 1.38 N Y
40 C6 C1 C C doub 1.38 N Y
41 C3 C2 C C doub 1.39 N Y
42 C1 C2 C C sing 1.4 N Y
43 C2 C31 C C sing 1.48 N N
44 C31 O33 C O doub 1.22 N N
45 C31 N32 C N sing 1.35 N N
46 C17 H53 C H sing 1.09 N N
47 C17 H52 C H sing 1.09 N N
48 C20 H54 C H sing 1.08 N N
49 C21 H55 C H sing 1.08 N N
50 C23 H56 C H sing 1.08 N N
51 C11 H50 C H sing 1.08 N N
52 C34 H66 C H sing 1.09 N N
53 C34 H67 C H sing 1.09 N N
54 C34 H68 C H sing 1.09 N N
55 C1 H43 C H sing 1.08 N N
56 C3 H44 C H sing 1.08 N N
57 C5 H45 C H sing 1.08 N N
58 C6 H46 C H sing 1.08 N N
59 N7 H47 N H sing 0.97 N N
60 C8 H48 C H sing 1.09 N N
61 C10 H49 C H sing 1.08 N N
62 C14 H51 C H sing 1.08 N N
63 N24 H57 N H sing 0.98 N N
64 C25 H58 C H sing 1.09 N N
65 C25 H59 C H sing 1.09 N N
66 C29 H61 C H sing 1.09 N N
67 C29 H60 C H sing 1.09 N N
68 C30 H63 C H sing 1.09 N N
69 C30 H62 C H sing 1.09 N N
70 N32 H64 N H sing 0.97 N N
71 N32 H65 N H sing 0.97 N N
72 C35 H70 C H sing 1.09 N N
73 C35 H69 C H sing 1.09 N N
74 C35 H71 C H sing 1.09 N N
75 C38 H72 C H sing 1.09 N N
76 C39 H73 C H sing 1.09 N N
77 C39 H75 C H sing 1.09 N N
78 C39 H74 C H sing 1.09 N N
79 C40 H77 C H sing 1.09 N N
80 C40 H78 C H sing 1.09 N N
81 C40 H76 C H sing 1.09 N N