Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 876    

Bonds between two atoms of the molecule

Total Number of Bonds: 82


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.38 N Y
2 C1 C6 C C doub 1.38 N Y
3 C1 H1 C H sing 1.08 N N
4 C2 C3 C C doub 1.38 N Y
5 C2 H2 C H sing 1.08 N N
6 C3 C4 C C sing 1.38 N Y
7 C3 P26 C P sing 1.81 N N
8 C4 C5 C C doub 1.38 N Y
9 C4 P69 C P sing 1.81 N N
10 C5 C6 C C sing 1.38 N Y
11 C5 H5 C H sing 1.08 N N
12 C6 C7 C C sing 1.51 N N
13 C7 C8 C C sing 1.53 N N
14 C7 H71 C H sing 1.09 N N
15 C7 H72A C H sing 1.09 N N
16 C8 C9 C C sing 1.51 N N
17 C8 N11 C N sing 1.46 N N
18 C8 H8 C H sing 1.09 N N
19 C9 N10 C N sing 1.35 N N
20 C9 O15 C O doub 1.21 N N
21 N10 C16 N C sing 1.46 N N
22 N10 H10 N H sing 0.97 N N
23 N11 C12 N C sing 1.35 N N
24 N11 H11 N H sing 0.97 N N
25 C12 C13 C C sing 1.51 N N
26 C12 O14 C O doub 1.21 N N
27 C13 H131 C H sing 1.09 N N
28 C13 H132 C H sing 1.09 N N
29 C13 H133 C H sing 1.09 N N
30 C16 C17 C C sing 1.53 N N
31 C16 C22 C C sing 1.51 N N
32 C16 H16 C H sing 1.09 N N
33 C17 C18 C C sing 1.52 N N
34 C17 H171 C H sing 1.09 N N
35 C17 H172 C H sing 1.09 N N
36 C18 C19 C C sing 1.52 N N
37 C18 H181 C H sing 1.09 N N
38 C18 H182 C H sing 1.09 N N
39 C19 C20 C C sing 1.53 N N
40 C19 H191 C H sing 1.09 N N
41 C19 H192 C H sing 1.09 N N
42 C20 N21 C N sing 1.47 N N
43 C20 H201 C H sing 1.09 N N
44 C20 H202 C H sing 1.09 N N
45 N21 C22 N C sing 1.34 N N
46 N21 C23 N C sing 1.46 N N
47 C22 O25 C O doub 1.21 N N
48 C23 C24 C C sing 1.51 N N
49 C23 H231 C H sing 1.09 N N
50 C23 H232 C H sing 1.09 N N
51 C24 C27 C C sing 1.38 N Y
52 C24 C31 C C doub 1.38 N Y
53 P26 O73 P O doub 1.48 N N
54 P26 O74 P O sing 1.61 N N
55 P26 O75 P O sing 1.61 N N
56 C27 C28 C C doub 1.38 N Y
57 C27 H27 C H sing 1.08 N N
58 C28 C29 C C sing 1.39 N Y
59 C28 H28 C H sing 1.08 N N
60 C29 C30 C C doub 1.39 N Y
61 C29 C32 C C sing 1.48 N Y
62 C30 C31 C C sing 1.38 N Y
63 C30 H30 C H sing 1.08 N N
64 C31 H31 C H sing 1.08 N N
65 C32 C59 C C sing 1.39 N Y
66 C32 C63 C C doub 1.39 N Y
67 C59 C60 C C doub 1.38 N Y
68 C59 H59 C H sing 1.08 N N
69 C60 C61 C C sing 1.38 N Y
70 C60 H60 C H sing 1.08 N N
71 C61 C62 C C doub 1.38 N Y
72 C61 H61 C H sing 1.08 N N
73 C62 C63 C C sing 1.38 N Y
74 C62 H62 C H sing 1.08 N N
75 C63 H63 C H sing 1.08 N N
76 P69 O70 P O sing 1.61 N N
77 P69 O71 P O doub 1.48 N N
78 P69 O72 P O sing 1.61 N N
79 O70 H70 O H sing 0.97 N N
80 O72 H72 O H sing 0.97 N N
81 O74 H74 O H sing 0.97 N N
82 O75 H75 O H sing 0.97 N N