Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 8DA    

Bonds between two atoms of the molecule

Total Number of Bonds: 36


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O19 C5' O C sing 1.43 N N
2 O19 H19 O H sing 0.97 N N
3 C5' C4' C C sing 1.53 N N
4 C5' H5'1 C H sing 1.09 N N
5 C5' H5'2 C H sing 1.09 N N
6 C4' C3' C C sing 1.55 N N
7 C4' O4' C O sing 1.45 N N
8 C4' H4' C H sing 1.09 N N
9 C3' O3' C O sing 1.43 N N
10 C3' C2' C C sing 1.55 N N
11 C3' H3' C H sing 1.09 N N
12 O3' H1 O H sing 0.97 N N
13 O4' C1' O C sing 1.44 N N
14 C1' C2' C C sing 1.55 N N
15 C1' N9 C N sing 1.47 N N
16 C1' H1' C H sing 1.09 N N
17 C2' H2'1 C H sing 1.09 N N
18 C2' H2'2 C H sing 1.09 N N
19 N9 C4 N C sing 1.37 N N
20 N9 C8 N C sing 1.35 N N
21 C4 N3 C N doub 1.31 N N
22 C4 C5 C C sing 1.43 N N
23 N3 C2 N C sing 1.47 N N
24 C5 N7 C N sing 1.4 N N
25 C5 C6 C C doub 1.36 N N
26 N7 C8 N C sing 1.35 N N
27 N7 HN7 N H sing 0.97 N N
28 C8 O18 C O doub 1.22 N N
29 C6 N6 C N sing 1.38 N N
30 C6 N1 C N sing 1.39 N N
31 N6 HN61 N H sing 0.97 N N
32 N6 HN62 N H sing 0.97 N N
33 N1 C2 N C sing 1.47 N N
34 N1 HN1 N H sing 0.97 N N
35 C2 H21 C H sing 1.09 N N
36 C2 H22 C H sing 1.09 N N