Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : 8NT    

Bonds between two atoms of the molecule

Total Number of Bonds: 40


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C5 C6 C C sing 1.54 N N
2 C5 S2 C S sing 1.83 N N
3 C6 C2 C C sing 1.54 N N
4 C2 C1 C C sing 1.53 N N
5 C2 S1 C S sing 1.83 N N
6 C1 C7 C C sing 1.53 N N
7 S2 S1 S S sing 2.07 N N
8 C7 C8 C C sing 1.53 N N
9 C8 C9 C C sing 1.53 N N
10 C9 C10 C C sing 1.51 N N
11 C10 N1 C N sing 1.35 N N
12 C10 O1 C O doub 1.21 N N
13 N1 C13 N C sing 1.46 N N
14 C13 C14 C C sing 1.53 N N
15 C15 C14 C C sing 1.53 N N
16 C15 S3 C S sing 1.81 N N
17 O3 S3 O S doub 1.42 N N
18 O2 S3 O S doub 1.42 N N
19 S3 O4 S O sing 1.52 N N
20 C1 H1 C H sing 1.09 N N
21 C1 H2 C H sing 1.09 N N
22 C2 H3 C H sing 1.09 N N
23 C13 H4 C H sing 1.09 N N
24 C13 H5 C H sing 1.09 N N
25 C14 H6 C H sing 1.09 N N
26 C14 H7 C H sing 1.09 N N
27 C15 H8 C H sing 1.09 N N
28 C15 H9 C H sing 1.09 N N
29 C5 H10 C H sing 1.09 N N
30 C5 H11 C H sing 1.09 N N
31 C6 H12 C H sing 1.09 N N
32 C6 H13 C H sing 1.09 N N
33 C7 H14 C H sing 1.09 N N
34 C7 H15 C H sing 1.09 N N
35 C8 H16 C H sing 1.09 N N
36 C8 H17 C H sing 1.09 N N
37 C9 H18 C H sing 1.09 N N
38 C9 H19 C H sing 1.09 N N
39 N1 H20 N H sing 0.97 N N
40 O4 H21 O H sing 0.97 N N