Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 8R9    

Bonds between two atoms of the molecule

Total Number of Bonds: 49


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C11 C10 C C doub 1.38 N Y
2 C11 C6 C C sing 1.39 N Y
3 C10 C9 C C sing 1.38 N Y
4 N3 C6 N C sing 1.4 N N
5 N3 C5 N C sing 1.35 N N
6 O2 N2 O N sing 1.22 N N
7 O2 C5 O C sing 1.35 N N
8 C6 C7 C C doub 1.39 N Y
9 O10 C15 O C sing 1.43 N N
10 C9 C8 C C doub 1.38 N Y
11 N1 C3 N C sing 1.47 N N
12 N1 C2 N C sing 1.35 N N
13 C3 C4 C C sing 1.51 N N
14 C3 C15 C C sing 1.53 N N
15 C7 C8 C C sing 1.38 N Y
16 N2 C4 N C doub 1.29 Z N
17 C5 O3 C O doub 1.21 N N
18 C4 O4 C O sing 1.36 N N
19 C15 C14 C C sing 1.53 N N
20 C1 C2 C C sing 1.51 N N
21 C2 O1 C O doub 1.21 N N
22 C14 O9 C O sing 1.43 N N
23 C14 C12 C C sing 1.53 N N
24 O4 C12 O C sing 1.43 N N
25 C12 C13 C C sing 1.53 N N
26 C13 O5 C O sing 1.43 N N
27 O8 S1 O S doub 1.42 N N
28 O5 S1 O S sing 1.52 N N
29 S1 O6 S O doub 1.42 N N
30 S1 O7 S O sing 1.52 N N
31 C1 H1 C H sing 1.09 N N
32 C1 H2 C H sing 1.09 N N
33 C1 H3 C H sing 1.09 N N
34 N1 H4 N H sing 0.97 N N
35 C3 H5 C H sing 1.09 N N
36 N3 H6 N H sing 0.97 N N
37 C7 H7 C H sing 1.08 N N
38 C8 H8 C H sing 1.08 N N
39 C9 H9 C H sing 1.08 N N
40 C10 H10 C H sing 1.08 N N
41 C11 H11 C H sing 1.08 N N
42 C12 H12 C H sing 1.09 N N
43 C13 H13 C H sing 1.09 N N
44 C13 H14 C H sing 1.09 N N
45 C14 H15 C H sing 1.09 N N
46 O9 H16 O H sing 0.97 N N
47 C15 H17 C H sing 1.09 N N
48 O10 H18 O H sing 0.97 N N
49 O7 H19 O H sing 0.97 N N