Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 8SP    

Bonds between two atoms of the molecule

Total Number of Bonds: 75


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N CA N C sing 1.47 N N
2 N H N H sing 1.01 N N
3 N H2 N H sing 1.01 N N
4 P OG P O sing 1.61 N N
5 P O2P P O doub 1.48 N N
6 P O3G P O sing 1.61 N N
7 P O3P P O sing 1.61 N N
8 OG CB O C sing 1.43 N N
9 C1A O1A C O doub 1.21 N N
10 C1A O1G C O sing 1.34 N N
11 C1A C2A C C sing 1.51 N N
12 C1B O1B C O doub 1.21 N N
13 C1B C2B C C sing 1.51 N N
14 C1B O2G C O sing 1.34 N N
15 CB CA C C sing 1.53 N N
16 CB HB3 C H sing 1.09 N N
17 CB HB2 C H sing 1.09 N N
18 C1G O1G C O sing 1.45 N N
19 C1G C2G C C sing 1.53 N N
20 C1G H11G C H sing 1.09 N N
21 C1G H21G C H sing 1.09 N N
22 C2A C3A C C sing 1.53 N N
23 C2A H12A C H sing 1.09 N N
24 C2A H22A C H sing 1.09 N N
25 C2B C3B C C sing 1.53 N N
26 C2B H12B C H sing 1.09 N N
27 C2B H22B C H sing 1.09 N N
28 CA C C C sing 1.51 N N
29 CA HA C H sing 1.09 N N
30 C2G O2G C O sing 1.45 N N
31 C2G C3G C C sing 1.53 N N
32 C2G H2G C H sing 1.09 N N
33 C3A C4A C C sing 1.53 N N
34 C3A H13A C H sing 1.09 N N
35 C3A H23A C H sing 1.09 N N
36 C3B C4B C C sing 1.53 N N
37 C3B H13B C H sing 1.09 N N
38 C3B H23B C H sing 1.09 N N
39 C O C O doub 1.21 N N
40 C OXT C O sing 1.34 N N
41 C3G O3G C O sing 1.43 N N
42 C3G H13G C H sing 1.09 N N
43 C3G H23G C H sing 1.09 N N
44 C4A C5A C C sing 1.53 N N
45 C4A H14A C H sing 1.09 N N
46 C4A H24A C H sing 1.09 N N
47 C4B C5B C C sing 1.53 N N
48 C4B H14B C H sing 1.09 N N
49 C4B H24B C H sing 1.09 N N
50 C5A C6A C C sing 1.53 N N
51 C5A H15A C H sing 1.09 N N
52 C5A H25A C H sing 1.09 N N
53 C5B C6B C C sing 1.53 N N
54 C5B H15B C H sing 1.09 N N
55 C5B H25B C H sing 1.09 N N
56 C6A C7A C C sing 1.53 N N
57 C6A H16A C H sing 1.09 N N
58 C6A H26A C H sing 1.09 N N
59 C6B C7B C C sing 1.53 N N
60 C6B H16B C H sing 1.09 N N
61 C6B H26B C H sing 1.09 N N
62 C7A C8A C C sing 1.53 N N
63 C7A H17A C H sing 1.09 N N
64 C7A H27A C H sing 1.09 N N
65 C7B C8B C C sing 1.53 N N
66 C7B H17B C H sing 1.09 N N
67 C7B H27B C H sing 1.09 N N
68 C8A H18A C H sing 1.09 N N
69 C8A H28A C H sing 1.09 N N
70 C8A H38A C H sing 1.09 N N
71 C8B H18B C H sing 1.09 N N
72 C8B H28B C H sing 1.09 N N
73 C8B H38B C H sing 1.09 N N
74 OXT HXT O H sing 0.97 N N
75 O3P H42 O H sing 0.97 N N