Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
8UL
Bonds between two atoms of the molecule
Total Number of Bonds: 61
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
O31
C29
O
C
doub
1.21
N
N
2
C29
O32
C
O
sing
1.34
N
N
3
C29
C26
C
C
sing
1.51
N
N
4
C25
C26
C
C
sing
1.53
N
N
5
C25
C24
C
C
sing
1.53
N
N
6
C26
C27
C
C
sing
1.53
N
N
7
N11
N12
N
N
sing
1.4
N
Y
8
N11
C10
N
C
sing
1.35
N
Y
9
C24
N23
C
N
sing
1.47
N
N
10
N12
C6
N
C
doub
1.3
N
Y
11
C13
C10
C
C
sing
1.51
N
N
12
C10
C5
C
C
doub
1.34
N
Y
13
C27
C28
C
C
sing
1.53
N
N
14
C6
C5
C
C
sing
1.41
N
Y
15
C6
O1
C
O
sing
1.36
N
N
16
N23
C28
N
C
sing
1.47
N
N
17
N23
C19
N
C
sing
1.4
N
N
18
C5
C4
C
C
sing
1.51
N
N
19
O1
C2
O
C
sing
1.35
N
N
20
C20
C19
C
C
doub
1.39
N
Y
21
C20
C16
C
C
sing
1.38
N
Y
22
C19
C30
C
C
sing
1.39
N
Y
23
C4
C16
C
C
sing
1.51
N
N
24
C4
C14
C
C
sing
1.53
N
N
25
C4
C3
C
C
sing
1.51
N
N
26
C15
C14
C
C
sing
1.53
N
N
27
C16
C17
C
C
doub
1.38
N
Y
28
C30
C18
C
C
doub
1.38
N
Y
29
C22
C14
C
C
sing
1.53
N
N
30
C2
C3
C
C
doub
1.35
N
N
31
C2
N7
C
N
sing
1.37
N
N
32
C3
C8
C
C
sing
1.43
N
N
33
C17
C18
C
C
sing
1.39
N
Y
34
C18
F21
C
F
sing
1.35
N
N
35
C8
N9
C
N
trip
1.14
N
N
36
C14
H1
C
H
sing
1.09
N
N
37
C15
H2
C
H
sing
1.09
N
N
38
C15
H3
C
H
sing
1.09
N
N
39
C15
H4
C
H
sing
1.09
N
N
40
C17
H5
C
H
sing
1.08
N
N
41
C24
H6
C
H
sing
1.09
N
N
42
C24
H7
C
H
sing
1.09
N
N
43
C25
H8
C
H
sing
1.09
N
N
44
C25
H9
C
H
sing
1.09
N
N
45
O32
H10
O
H
sing
0.97
N
N
46
C26
H11
C
H
sing
1.09
N
N
47
C27
H12
C
H
sing
1.09
N
N
48
C27
H13
C
H
sing
1.09
N
N
49
C28
H14
C
H
sing
1.09
N
N
50
C28
H15
C
H
sing
1.09
N
N
51
C30
H16
C
H
sing
1.08
N
N
52
C20
H17
C
H
sing
1.08
N
N
53
C22
H18
C
H
sing
1.09
N
N
54
C22
H19
C
H
sing
1.09
N
N
55
C22
H20
C
H
sing
1.09
N
N
56
N7
H21
N
H
sing
0.97
N
N
57
N7
H22
N
H
sing
0.97
N
N
58
C13
H23
C
H
sing
1.09
N
N
59
C13
H24
C
H
sing
1.09
N
N
60
C13
H25
C
H
sing
1.09
N
N
61
N11
H26
N
H
sing
0.97
N
N