Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 8V9    

Bonds between two atoms of the molecule

Total Number of Bonds: 98


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C31 S02 C S sing 1.81 N N
2 O06 C29 O C doub 1.21 N N
3 C27 C24 C C doub 1.38 N Y
4 C27 C28 C C sing 1.38 N Y
5 C33 C35 C C doub 1.38 N Y
6 C33 C32 C C sing 1.38 N Y
7 C30 C29 C C sing 1.51 N N
8 C30 C32 C C sing 1.51 N N
9 C29 N04 C N sing 1.35 N N
10 C24 C20 C C sing 1.38 N Y
11 C28 C26 C C doub 1.38 N Y
12 C35 C37 C C sing 1.39 N Y
13 C32 C34 C C doub 1.38 N Y
14 S02 C25 S C sing 1.81 N N
15 N04 C22 N C sing 1.47 N N
16 C22 C25 C C sing 1.53 N N
17 C22 C21 C C sing 1.51 N N
18 C20 C17 C C sing 1.51 N N
19 C20 C23 C C doub 1.38 N Y
20 C37 O07 C O sing 1.36 N N
21 C37 C36 C C doub 1.39 N Y
22 C26 C23 C C sing 1.38 N Y
23 N03 C21 N C sing 1.35 N N
24 N03 C14 N C sing 1.46 N N
25 C34 C36 C C sing 1.38 N Y
26 C17 C14 C C sing 1.53 N N
27 C21 O05 C O doub 1.21 N N
28 C14 C13 C C sing 1.53 N N
29 O03 C13 O C sing 1.43 N N
30 C13 C12 C C sing 1.51 N N
31 C12 O04 C O doub 1.21 N N
32 C12 N01 C N sing 1.35 N N
33 C18 C19 C C doub 1.38 N Y
34 C18 C15 C C sing 1.38 N Y
35 C19 C16 C C sing 1.38 N Y
36 C15 C09 C C doub 1.38 N Y
37 N01 C04 N C sing 1.48 N N
38 N01 C01 N C sing 1.46 N N
39 C04 S01 C S sing 1.84 N N
40 C16 C11 C C doub 1.38 N Y
41 C09 C11 C C sing 1.38 N Y
42 C09 C03 C C sing 1.51 N N
43 C01 C05 C C sing 1.51 N N
44 C01 C02 C C sing 1.54 N N
45 O02 C05 O C doub 1.21 N N
46 C05 N02 C N sing 1.35 N N
47 S01 C02 S C sing 1.84 N N
48 C11 C10 C C sing 1.51 N N
49 C07 C02 C C sing 1.53 N N
50 N02 C03 N C sing 1.47 N N
51 C02 C08 C C sing 1.53 N N
52 C03 C06 C C sing 1.54 N N
53 C10 C06 C C sing 1.54 N N
54 O01 C06 O C sing 1.43 N N
55 C34 H1 C H sing 1.08 N N
56 C35 H2 C H sing 1.08 N N
57 C36 H3 C H sing 1.08 N N
58 C27 H4 C H sing 1.08 N N
59 C28 H5 C H sing 1.08 N N
60 C30 H6 C H sing 1.09 N N
61 C30 H7 C H sing 1.09 N N
62 C10 H8 C H sing 1.09 N N
63 C10 H9 C H sing 1.09 N N
64 O01 H10 O H sing 0.97 N N
65 O03 H11 O H sing 0.97 N N
66 O07 H12 O H sing 0.97 N N
67 N02 H13 N H sing 0.97 N N
68 N03 H14 N H sing 0.97 N N
69 N04 H15 N H sing 0.97 N N
70 C01 H16 C H sing 1.09 N N
71 C03 H17 C H sing 1.09 N N
72 C04 H18 C H sing 1.09 N N
73 C04 H19 C H sing 1.09 N N
74 C06 H20 C H sing 1.09 N N
75 C07 H21 C H sing 1.09 N N
76 C07 H22 C H sing 1.09 N N
77 C07 H23 C H sing 1.09 N N
78 C08 H24 C H sing 1.09 N N
79 C08 H25 C H sing 1.09 N N
80 C08 H26 C H sing 1.09 N N
81 C13 H27 C H sing 1.09 N N
82 C14 H28 C H sing 1.09 N N
83 C15 H29 C H sing 1.08 N N
84 C16 H30 C H sing 1.08 N N
85 C17 H31 C H sing 1.09 N N
86 C17 H32 C H sing 1.09 N N
87 C18 H33 C H sing 1.08 N N
88 C19 H34 C H sing 1.08 N N
89 C22 H35 C H sing 1.09 N N
90 C23 H36 C H sing 1.08 N N
91 C24 H37 C H sing 1.08 N N
92 C25 H38 C H sing 1.09 N N
93 C25 H39 C H sing 1.09 N N
94 C26 H40 C H sing 1.08 N N
95 C31 H41 C H sing 1.09 N N
96 C31 H42 C H sing 1.09 N N
97 C31 H43 C H sing 1.09 N N
98 C33 H44 C H sing 1.08 N N