Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 9K5    

Bonds between two atoms of the molecule

Total Number of Bonds: 50


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C15 N2 C N doub 1.32 N Y
2 C15 N3 C N sing 1.32 N Y
3 N2 C14 N C sing 1.33 N Y
4 O6 C9 O C sing 1.43 N N
5 O4 C8 O C sing 1.44 N N
6 O4 C11 O C sing 1.44 N N
7 C8 C7 C C sing 1.53 N N
8 C8 C9 C C sing 1.55 N N
9 N3 C16 N C doub 1.33 N Y
10 C11 N C N sing 1.46 N N
11 C11 C10 C C sing 1.54 N N
12 C14 N C N sing 1.37 N Y
13 C14 C13 C C doub 1.41 N Y
14 C7 O3 C O sing 1.45 N N
15 C9 C10 C C sing 1.55 N N
16 N C12 N C sing 1.36 N Y
17 C16 C13 C C sing 1.41 N Y
18 C16 N4 C N sing 1.38 N N
19 C10 O5 C O sing 1.43 N N
20 C13 N1 C N sing 1.35 N Y
21 O3 C6 O C sing 1.35 N N
22 C12 N1 C N doub 1.3 N Y
23 O2 C6 O C doub 1.22 N N
24 C6 C2 C C sing 1.48 N N
25 C2 C1 C C doub 1.4 N Y
26 C2 C3 C C sing 1.4 N Y
27 C1 C C C sing 1.38 N Y
28 C3 C4 C C doub 1.38 N Y
29 C C5 C C doub 1.38 N Y
30 C4 C5 C C sing 1.38 N Y
31 C4 S C S sing 1.76 N N
32 O S O S doub 1.42 N N
33 S O1 S O doub 1.42 N N
34 C1 H1 C H sing 1.08 N N
35 C3 H2 C H sing 1.08 N N
36 O5 H3 O H sing 0.97 N N
37 C7 H4 C H sing 1.09 N N
38 C7 H5 C H sing 1.09 N N
39 C8 H6 C H sing 1.09 N N
40 C9 H7 C H sing 1.09 N N
41 C10 H8 C H sing 1.09 N N
42 C11 H9 C H sing 1.09 N N
43 C12 H10 C H sing 1.08 N N
44 C15 H11 C H sing 1.08 N N
45 C5 H14 C H sing 1.08 N N
46 C H15 C H sing 1.08 N N
47 O6 H16 O H sing 0.97 N N
48 N4 H17 N H sing 0.97 N N
49 N4 H18 N H sing 0.97 N N
50 S F1 S F sing 1.61 N N