Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 9NU    

Bonds between two atoms of the molecule

Total Number of Bonds: 86


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O3 C17 O C doub 1.21 N N
2 C17 C18 C C sing 1.48 N N
3 C17 N3 C N sing 1.35 N N
4 C18 C23 C C sing 1.4 N Y
5 C18 C19 C C doub 1.4 N Y
6 C23 C22 C C doub 1.38 N Y
7 C22 C21 C C sing 1.38 N Y
8 C21 C24 C C sing 1.51 N N
9 C21 C20 C C doub 1.38 N Y
10 C24 N4 C N sing 1.46 N N
11 N4 N5 N N sing 1.4 N Y
12 N4 C25 N C sing 1.35 N Y
13 N5 C27 N C doub 1.31 N Y
14 C27 C26 C C sing 1.4 N Y
15 C26 C25 C C doub 1.35 N Y
16 C20 C19 C C sing 1.38 N Y
17 N3 C2 N C sing 1.47 N N
18 C2 C1 C C sing 1.53 N N
19 C2 C3 C C sing 1.51 N N
20 C1 O4 C O sing 1.43 N N
21 C1 C C C sing 1.53 N N
22 O4 C28 O C sing 1.43 N N
23 C28 C31 C C sing 1.53 N N
24 C28 C30 C C sing 1.53 N N
25 C28 C29 C C sing 1.53 N N
26 C3 O C O doub 1.21 N N
27 C3 N C N sing 1.35 N N
28 N C4 N C sing 1.47 N N
29 C4 C7 C C sing 1.54 N N
30 C4 C5 C C sing 1.55 N N
31 C7 N1 C N sing 1.47 N N
32 N1 C6 N C sing 1.47 N N
33 N1 C8 N C sing 1.35 N N
34 C6 C15 C C sing 1.51 N N
35 C6 C5 C C sing 1.55 N N
36 C15 N2 C N sing 1.35 N N
37 C15 O2 C O doub 1.21 N N
38 N2 C16 N C sing 1.47 N N
39 C8 O1 C O doub 1.22 N N
40 C8 C9 C C sing 1.48 N N
41 C9 C14 C C sing 1.4 N Y
42 C9 C10 C C doub 1.4 N Y
43 C14 C13 C C doub 1.38 N Y
44 C13 C12 C C sing 1.38 N Y
45 C12 C11 C C doub 1.38 N Y
46 C11 C10 C C sing 1.38 N Y
47 N3 H3 N H sing 0.97 N N
48 C23 H23 C H sing 1.08 N N
49 C19 H19 C H sing 1.08 N N
50 C22 H22 C H sing 1.08 N N
51 C24 H241 C H sing 1.09 N N
52 C24 H242 C H sing 1.09 N N
53 C20 H20 C H sing 1.08 N N
54 C25 H25 C H sing 1.08 N N
55 C27 H27 C H sing 1.08 N N
56 C26 H26 C H sing 1.08 N N
57 C2 H2 C H sing 1.09 N N
58 C1 H1 C H sing 1.09 N N
59 C HC1 C H sing 1.09 N N
60 C HC2 C H sing 1.09 N N
61 C HC3 C H sing 1.09 N N
62 C31 H311 C H sing 1.09 N N
63 C31 H312 C H sing 1.09 N N
64 C31 H313 C H sing 1.09 N N
65 C30 H301 C H sing 1.09 N N
66 C30 H302 C H sing 1.09 N N
67 C30 H303 C H sing 1.09 N N
68 C29 H291 C H sing 1.09 N N
69 C29 H292 C H sing 1.09 N N
70 C29 H293 C H sing 1.09 N N
71 N H N H sing 0.97 N N
72 C4 H4 C H sing 1.09 N N
73 C7 H71C C H sing 1.09 N N
74 C7 H72C C H sing 1.09 N N
75 C5 H51C C H sing 1.09 N N
76 C5 H52C C H sing 1.09 N N
77 C6 H6 C H sing 1.09 N N
78 N2 HA N H sing 0.97 N N
79 C16 H161 C H sing 1.09 N N
80 C16 H162 C H sing 1.09 N N
81 C16 H163 C H sing 1.09 N N
82 C14 H14 C H sing 1.08 N N
83 C10 H10 C H sing 1.08 N N
84 C13 H13 C H sing 1.08 N N
85 C12 H12 C H sing 1.08 N N
86 C11 H11 C H sing 1.08 N N