Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 9P2    

Bonds between two atoms of the molecule

Total Number of Bonds: 84


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C20 O21 C O sing 1.44 N N
2 C20 O19 C O sing 1.44 N N
3 O21 C16 O C sing 1.37 N N
4 O19 C17 O C sing 1.37 N N
5 C16 C17 C C doub 1.39 N Y
6 C16 C15 C C sing 1.39 N Y
7 C17 C18 C C sing 1.38 N Y
8 C15 C14 C C doub 1.38 N Y
9 C18 C13 C C doub 1.38 N Y
10 C14 C13 C C sing 1.38 N Y
11 C13 C12 C C sing 1.51 N N
12 C12 N11 C N sing 1.47 N N
13 C40 C39 C C doub 1.38 N Y
14 C40 C41 C C sing 1.38 N Y
15 C34 C33 C C doub 1.38 N Y
16 C34 C35 C C sing 1.38 N Y
17 C33 C32 C C sing 1.39 N Y
18 C39 C38 C C sing 1.4 N Y
19 C41 C42 C C doub 1.38 N Y
20 C38 C01 C C sing 1.48 N N
21 C38 C43 C C doub 1.4 N Y
22 N02 C01 N C doub 1.31 N Y
23 N02 C03 N C sing 1.35 N Y
24 N11 C22 N C sing 1.47 N N
25 N11 C10 N C sing 1.47 N N
26 C31 C30 C C doub 1.38 N Y
27 C31 C23 C C sing 1.38 N Y
28 C35 C36 C C doub 1.38 N Y
29 C01 N05 C N sing 1.36 N Y
30 C32 C03 C C sing 1.48 N N
31 C32 C37 C C doub 1.39 N Y
32 C03 C04 C C doub 1.36 N Y
33 C42 C43 C C sing 1.38 N Y
34 C30 C29 C C sing 1.39 N Y
35 N05 C04 N C sing 1.37 N Y
36 N05 C06 N C sing 1.47 N N
37 C22 C23 C C sing 1.51 N N
38 C04 C10 C C sing 1.51 N N
39 C06 C07 C C sing 1.53 N N
40 C23 C24 C C doub 1.38 N Y
41 C36 C37 C C sing 1.38 N Y
42 C29 O28 C O sing 1.36 N N
43 C29 C25 C C doub 1.39 N Y
44 C24 C25 C C sing 1.39 N Y
45 O28 C27 O C sing 1.44 N N
46 C07 C08 C C sing 1.53 N N
47 C25 O26 C O sing 1.37 N N
48 C08 C09 C C sing 1.53 N N
49 C27 O26 C O sing 1.44 N N
50 C15 H1 C H sing 1.08 N N
51 C18 H2 C H sing 1.08 N N
52 C20 H3 C H sing 1.09 N N
53 C20 H4 C H sing 1.09 N N
54 C06 H5 C H sing 1.09 N N
55 C06 H6 C H sing 1.09 N N
56 C07 H7 C H sing 1.09 N N
57 C07 H8 C H sing 1.09 N N
58 C08 H9 C H sing 1.09 N N
59 C08 H10 C H sing 1.09 N N
60 C09 H11 C H sing 1.09 N N
61 C09 H12 C H sing 1.09 N N
62 C09 H13 C H sing 1.09 N N
63 C10 H14 C H sing 1.09 N N
64 C10 H15 C H sing 1.09 N N
65 C12 H17 C H sing 1.09 N N
66 C12 H18 C H sing 1.09 N N
67 C14 H19 C H sing 1.08 N N
68 C22 H20 C H sing 1.09 N N
69 C22 H21 C H sing 1.09 N N
70 C24 H22 C H sing 1.08 N N
71 C27 H23 C H sing 1.09 N N
72 C27 H24 C H sing 1.09 N N
73 C30 H25 C H sing 1.08 N N
74 C31 H26 C H sing 1.08 N N
75 C33 H27 C H sing 1.08 N N
76 C34 H28 C H sing 1.08 N N
77 C35 H29 C H sing 1.08 N N
78 C36 H30 C H sing 1.08 N N
79 C37 H31 C H sing 1.08 N N
80 C39 H32 C H sing 1.08 N N
81 C40 H33 C H sing 1.08 N N
82 C41 H34 C H sing 1.08 N N
83 C42 H35 C H sing 1.08 N N
84 C43 H36 C H sing 1.08 N N