Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : 9RQ    

Bonds between two atoms of the molecule

Total Number of Bonds: 47


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C4 C5 C C doub 1.38 N Y
2 C4 C3 C C sing 1.38 N Y
3 C14 C13 C C sing 1.51 N N
4 C14 S1 C S sing 1.81 N N
5 C5 C6 C C sing 1.38 N Y
6 C6 C7 C C doub 1.38 N Y
7 C11 C10 C C doub 1.36 N Y
8 C11 C12 C C sing 1.4 N Y
9 C7 C8 C C sing 1.38 N Y
10 C8 C3 C C doub 1.38 N Y
11 C9 C10 C C sing 1.39 N Y
12 C9 O2 C O sing 1.36 N N
13 C9 C18 C C doub 1.39 N Y
14 C12 C13 C C sing 1.46 N N
15 C12 C17 C C doub 1.41 N Y
16 C13 C15 C C doub 1.36 N N
17 C3 C1 C C sing 1.51 N N
18 O1 P1 O P sing 1.61 N N
19 P1 C1 P C sing 1.82 N N
20 P1 O2 P O sing 1.61 N N
21 P1 O8 P O doub 1.48 N N
22 C1 C2 C C sing 1.53 N N
23 S1 O3 S O sing 1.52 N N
24 S1 O4 S O doub 1.42 N N
25 S1 O5 S O doub 1.42 N N
26 C15 C16 C C sing 1.41 N N
27 C16 O6 C O sing 1.34 N N
28 C16 O7 C O doub 1.22 N N
29 O6 C17 O C sing 1.35 N N
30 C17 C18 C C sing 1.39 N Y
31 C4 H5 C H sing 1.08 N N
32 C14 H12 C H sing 1.09 N N
33 C14 H13 C H sing 1.09 N N
34 C5 H6 C H sing 1.08 N N
35 C6 H7 C H sing 1.08 N N
36 C11 H11 C H sing 1.08 N N
37 C7 H8 C H sing 1.08 N N
38 C8 H9 C H sing 1.08 N N
39 C10 H10 C H sing 1.08 N N
40 O1 H17 O H sing 0.97 N N
41 C1 H1 C H sing 1.09 N N
42 C2 H3 C H sing 1.09 N N
43 C2 H4 C H sing 1.09 N N
44 C2 H2 C H sing 1.09 N N
45 O3 H14 O H sing 0.97 N N
46 C15 H15 C H sing 1.08 N N
47 C18 H16 C H sing 1.08 N N