Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : A1AKR    

Bonds between two atoms of the molecule

Total Number of Bonds: 51


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C N C N sing 1.47 N N
2 N C1 N C sing 1.39 N Y
3 C2 C1 C C sing 1.42 N N
4 O C2 O C doub 1.22 N N
5 O1 C2 O C sing 1.35 N N
6 C1 C3 C C doub 1.38 N Y
7 C3 N1 C N sing 1.39 N N
8 N1 C4 N C sing 1.35 N N
9 O2 C4 O C doub 1.22 N N
10 C4 C5 C C sing 1.48 N N
11 C5 C6 C C doub 1.4 N Y
12 C6 C7 C C sing 1.38 N Y
13 C7 C8 C C doub 1.39 N Y
14 C8 N2 C N sing 1.39 N N
15 N2 C9 N C sing 1.35 N N
16 C9 O3 C O doub 1.22 N N
17 N3 C9 N C sing 1.35 N N
18 C10 N3 C N sing 1.46 N N
19 C10 C11 C C sing 1.53 N N
20 C11 C12 C C sing 1.53 N N
21 C12 C10 C C sing 1.53 N N
22 C13 C8 C C sing 1.39 N Y
23 C14 C13 C C doub 1.38 N Y
24 C5 C14 C C sing 1.4 N Y
25 C15 C3 C C sing 1.46 N Y
26 C15 C16 C C doub 1.4 N Y
27 C16 C17 C C sing 1.38 N Y
28 C17 C18 C C doub 1.39 N Y
29 C18 N4 C N sing 1.31 N Y
30 N4 C19 N C doub 1.33 N Y
31 C19 C15 C C sing 1.41 N Y
32 N C19 N C sing 1.37 N Y
33 N1 H4 N H sing 0.97 N N
34 N3 H8 N H sing 0.97 N N
35 C6 H5 C H sing 1.08 N N
36 C7 H6 C H sing 1.08 N N
37 C10 H9 C H sing 1.09 N N
38 C13 H14 C H sing 1.08 N N
39 C17 H17 C H sing 1.08 N N
40 C12 H13 C H sing 1.09 N N
41 C12 H12 C H sing 1.09 N N
42 C11 H11 C H sing 1.09 N N
43 C11 H10 C H sing 1.09 N N
44 N2 H7 N H sing 0.97 N N
45 C14 H15 C H sing 1.08 N N
46 O1 H3 O H sing 0.97 N N
47 C H1 C H sing 1.09 N N
48 C H2 C H sing 1.09 N N
49 C H C H sing 1.09 N N
50 C18 H18 C H sing 1.08 N N
51 C16 H16 C H sing 1.08 N N