Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : A1ANY    

Bonds between two atoms of the molecule

Total Number of Bonds: 65


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C C1 C C sing 1.53 N N
2 C2 C1 C C sing 1.53 N N
3 C1 C3 C C sing 1.53 N N
4 N C3 N C sing 1.47 N N
5 C4 N C N sing 1.38 N N
6 C4 N1 C N doub 1.33 N Y
7 N1 C5 N C sing 1.32 N Y
8 C5 N2 C N doub 1.31 N Y
9 N2 C6 N C sing 1.33 N Y
10 C6 N3 C N sing 1.37 N Y
11 N3 C7 N C sing 1.38 N Y
12 C8 C7 C C sing 1.48 N N
13 C8 C9 C C sing 1.41 N N
14 C9 C10 C C doub 1.36 N N
15 C10 C11 C C sing 1.41 N N
16 O C11 O C doub 1.22 N N
17 C11 N4 C N sing 1.35 N N
18 C12 N4 C N sing 1.46 N N
19 N4 C13 N C sing 1.36 N N
20 C13 C8 C C doub 1.38 N N
21 C7 C14 C C doub 1.36 N Y
22 C14 C15 C C sing 1.46 N Y
23 C15 C4 C C sing 1.41 N Y
24 C6 C15 C C doub 1.41 N Y
25 C3 C16 C C sing 1.51 N N
26 C16 C17 C C doub 1.38 N Y
27 C17 C18 C C sing 1.38 N Y
28 C18 C19 C C doub 1.39 N Y
29 C19 C20 C C sing 1.38 N Y
30 C21 C20 C C doub 1.39 N Y
31 C16 C21 C C sing 1.38 N Y
32 C20 S C S sing 1.77 N N
33 O1 S O S doub 1.42 N N
34 S O2 S O doub 1.42 N N
35 C22 S C S sing 1.82 N N
36 C23 C22 C C sing 1.54 N N
37 C24 C23 C C sing 1.52 N N
38 C19 C24 C C sing 1.5 N N
39 N3 H1 N H sing 0.97 N N
40 C5 H10 C H sing 1.08 N N
41 C10 H12 C H sing 1.08 N N
42 C13 H16 C H sing 1.08 N N
43 C17 H18 C H sing 1.08 N N
44 C21 H20 C H sing 1.08 N N
45 C22 H21 C H sing 1.09 N N
46 C22 H22 C H sing 1.09 N N
47 C24 H25 C H sing 1.09 N N
48 C24 H26 C H sing 1.09 N N
49 C23 H24 C H sing 1.09 N N
50 C23 H23 C H sing 1.09 N N
51 C18 H19 C H sing 1.08 N N
52 C3 H C H sing 1.09 N N
53 C1 H5 C H sing 1.09 N N
54 C2 H8 C H sing 1.09 N N
55 C2 H6 C H sing 1.09 N N
56 C2 H7 C H sing 1.09 N N
57 C H4 C H sing 1.09 N N
58 C H3 C H sing 1.09 N N
59 C H2 C H sing 1.09 N N
60 N H9 N H sing 0.97 N N
61 C14 H17 C H sing 1.08 N N
62 C12 H14 C H sing 1.09 N N
63 C12 H13 C H sing 1.09 N N
64 C12 H15 C H sing 1.09 N N
65 C9 H11 C H sing 1.08 N N