Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : AFM    

Bonds between two atoms of the molecule

Total Number of Bonds: 62


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C03 C04 C C doub 1.38 N Y
2 C03 C02 C C sing 1.38 N Y
3 F01 C02 F C sing 1.35 N N
4 C04 C05 C C sing 1.38 N Y
5 C02 C24 C C doub 1.4 N Y
6 C12 C11 C C doub 1.37 N Y
7 C12 C13 C C sing 1.39 N Y
8 C11 C10 C C sing 1.39 N Y
9 C05 C23 C C doub 1.38 N Y
10 C05 C06 C C sing 1.51 N N
11 C24 C23 C C sing 1.4 N Y
12 C24 C25 C C sing 1.48 N N
13 O33 C25 O C doub 1.22 N N
14 N14 C13 N C sing 1.37 N Y
15 N14 N15 N N sing 1.4 N Y
16 C13 C17 C C doub 1.41 N Y
17 C10 O09 C O sing 1.36 N N
18 C10 C18 C C doub 1.38 N Y
19 C22 C06 C C sing 1.53 N N
20 C22 C21 C C sing 1.53 N N
21 C06 C07 C C sing 1.53 N N
22 C25 N26 C N sing 1.35 N N
23 O09 C08 O C sing 1.43 N N
24 N15 C16 N C doub 1.3 N Y
25 C17 C18 C C sing 1.4 N Y
26 C17 C16 C C sing 1.46 N Y
27 C21 N20 C N sing 1.47 N N
28 C08 C07 C C sing 1.53 N N
29 C07 C19 C C sing 1.53 N N
30 N26 C27 N C sing 1.46 N N
31 N20 C19 N C sing 1.47 N N
32 C27 C28 C C sing 1.51 N N
33 C28 N32 C N doub 1.31 N Y
34 C28 C29 C C sing 1.4 N Y
35 N32 N31 N N sing 1.4 N Y
36 N31 C30 N C sing 1.35 N Y
37 C29 C30 C C doub 1.35 N Y
38 C21 H1 C H sing 1.09 N N
39 C21 H2 C H sing 1.09 N N
40 C22 H3 C H sing 1.09 N N
41 C22 H4 C H sing 1.09 N N
42 C03 H5 C H sing 1.08 N N
43 C04 H6 C H sing 1.08 N N
44 C06 H7 C H sing 1.09 N N
45 C07 H8 C H sing 1.09 N N
46 C08 H9 C H sing 1.09 N N
47 C08 H10 C H sing 1.09 N N
48 C11 H11 C H sing 1.08 N N
49 C12 H12 C H sing 1.08 N N
50 N14 H13 N H sing 0.97 N N
51 C16 H14 C H sing 1.08 N N
52 C18 H15 C H sing 1.08 N N
53 C19 H16 C H sing 1.09 N N
54 C19 H17 C H sing 1.09 N N
55 N20 H18 N H sing 1.01 N N
56 C23 H20 C H sing 1.08 N N
57 N26 H21 N H sing 0.97 N N
58 C27 H22 C H sing 1.09 N N
59 C27 H23 C H sing 1.09 N N
60 C29 H24 C H sing 1.08 N N
61 C30 H25 C H sing 1.08 N N
62 N31 H26 N H sing 0.97 N N