Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : APT    

Bonds between two atoms of the molecule

Total Number of Bonds: 38


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C8 C13 C C sing 1.51 N N
2 C8 N4 C N sing 1.46 N N
3 C8 H82 C H sing 1.09 N N
4 C8 H81 C H sing 1.09 N N
5 N9 C9 N C doub 1.33 N Y
6 N9 C14 N C sing 1.32 N Y
7 C9 N3 C N sing 1.34 N Y
8 C9 C12 C C sing 1.42 N Y
9 N3 C10 N C doub 1.32 N Y
10 N3 H3 N H sing 0.97 N N
11 C10 N2 C N sing 1.38 N N
12 C10 N1 C N sing 1.33 N Y
13 N2 H21 N H sing 0.97 N N
14 N2 H22 N H sing 0.97 N N
15 N1 C11 N C doub 1.32 N Y
16 C11 O6 C O sing 1.35 N N
17 C11 C12 C C sing 1.42 N Y
18 O6 HO6 O H sing 0.97 N N
19 C12 N7 C N doub 1.33 N Y
20 N7 C13 N C sing 1.32 N Y
21 C13 C14 C C doub 1.39 N Y
22 C14 H9 C H sing 1.08 N N
23 N4 C6 N C sing 1.39 N N
24 N4 HN4 N H sing 0.97 N N
25 C1 C2 C C doub 1.37 N Y
26 C1 C6 C C sing 1.39 N Y
27 C1 H1 C H sing 1.08 N N
28 C2 C3 C C sing 1.4 N Y
29 C2 H2 C H sing 1.08 N N
30 C3 C4 C C doub 1.4 N Y
31 C3 C7 C C sing 1.47 N N
32 C4 C5 C C sing 1.37 N Y
33 C4 H4 C H sing 1.08 N N
34 C5 C6 C C doub 1.39 N Y
35 C5 H5 C H sing 1.08 N N
36 C7 O2 C O sing 1.35 N N
37 C7 O3 C O doub 1.21 N N
38 O2 HO2 O H sing 0.97 N N