Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : ARE    

Bonds between two atoms of the molecule

Total Number of Bonds: 112


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1A C2A C C sing 1.53 N N
2 C1A O5A C O sing 1.43 N N
3 C1A O4B C O sing 1.43 N N
4 C1A H1A C H sing 1.09 N N
5 C2A C3A C C sing 1.53 N N
6 C2A O2A C O sing 1.43 N N
7 C2A H2A C H sing 1.09 N N
8 C3A C4A C C sing 1.53 N N
9 C3A O3A C O sing 1.43 N N
10 C3A H3A C H sing 1.09 N N
11 C4A C5A C C sing 1.53 N N
12 C4A O4A C O sing 1.43 N N
13 C4A H4A C H sing 1.09 N N
14 C5A C6A C C sing 1.53 N N
15 C5A O5A C O sing 1.43 N N
16 C5A H5A C H sing 1.09 N N
17 C6A O6A C O sing 1.43 N N
18 C6A H6A1 C H sing 1.09 N N
19 C6A H6A2 C H sing 1.09 N N
20 O2A H9 O H sing 0.97 N N
21 O3A H8 O H sing 0.97 N N
22 O4A H7 O H sing 0.97 N N
23 O6A H6A O H sing 0.97 N N
24 C1B C2B C C sing 1.53 N N
25 C1B O5B C O sing 1.43 N N
26 C1B O4H C O sing 1.43 N N
27 C1B H1B C H sing 1.09 N N
28 C2B C3B C C sing 1.53 N N
29 C2B O2B C O sing 1.43 N N
30 C2B H2B C H sing 1.09 N N
31 C3B C4B C C sing 1.53 N N
32 C3B O3B C O sing 1.43 N N
33 C3B H3B C H sing 1.09 N N
34 C4B C5B C C sing 1.53 N N
35 C4B O4B C O sing 1.43 N N
36 C4B H4B C H sing 1.09 N N
37 C5B C6B C C sing 1.53 N N
38 C5B O5B C O sing 1.43 N N
39 C5B H5B C H sing 1.09 N N
40 C6B O6B C O sing 1.43 N N
41 C6B H6B1 C H sing 1.09 N N
42 C6B H6B2 C H sing 1.09 N N
43 O2B H11 O H sing 0.97 N N
44 O3B H10 O H sing 0.97 N N
45 O6B H6B O H sing 0.97 N N
46 C1C C2C C C sing 1.53 N N
47 C1C O5C C O sing 1.43 N N
48 C1C O4G C O sing 1.43 N N
49 C1C H1C C H sing 1.09 N N
50 C2C C3C C C sing 1.53 N N
51 C2C O2C C O sing 1.43 N N
52 C2C H2C C H sing 1.09 N N
53 C3C C4C C C sing 1.53 N N
54 C3C O3C C O sing 1.43 N N
55 C3C H3C C H sing 1.09 N N
56 C4C C5C C C sing 1.53 N N
57 C4C N4C C N sing 1.47 N N
58 C4C H4C C H sing 1.09 N N
59 C5C C6C C C sing 1.53 N N
60 C5C O5C C O sing 1.43 N N
61 C5C H5C C H sing 1.09 N N
62 C6C H6C1 C H sing 1.09 N N
63 C6C H6C2 C H sing 1.09 N N
64 C6C H6C3 C H sing 1.09 N N
65 O2C H4 O H sing 0.97 N N
66 O3C H5 O H sing 0.97 N N
67 N4C C1H N C sing 1.47 N N
68 N4C H6 N H sing 1.01 N N
69 C1H C2H C C sing 1.53 N N
70 C1H C6H C C sing 1.5 N N
71 C1H H1H C H sing 1.09 N N
72 C2H C3H C C sing 1.53 N N
73 C2H O2H C O sing 1.43 N N
74 C2H H2H C H sing 1.09 N N
75 C3H C4H C C sing 1.53 N N
76 C3H O3H C O sing 1.43 N N
77 C3H H3H C H sing 1.09 N N
78 C4H C5H C C sing 1.5 N N
79 C4H O4H C O sing 1.43 N N
80 C4H H4H C H sing 1.09 N N
81 C5H C6H C C doub 1.29 N N
82 C5H C7H C C sing 1.51 N N
83 C6H H6H C H sing 1.08 N N
84 C7H O7H C O sing 1.43 N N
85 C7H H7H1 C H sing 1.09 N N
86 C7H H7H2 C H sing 1.09 N N
87 O2H H13 O H sing 0.97 N N
88 O3H H12 O H sing 0.97 N N
89 O7H H7H O H sing 0.97 N N
90 C1G C2G C C sing 1.53 N N
91 C1G O1G C O sing 1.43 N N
92 C1G O5G C O sing 1.43 N N
93 C1G H1G C H sing 1.09 N N
94 C2G C3G C C sing 1.53 N N
95 C2G O2G C O sing 1.43 N N
96 C2G H2G C H sing 1.09 N N
97 C3G C4G C C sing 1.53 N N
98 C3G O3G C O sing 1.43 N N
99 C3G H3G C H sing 1.09 N N
100 C4G C5G C C sing 1.53 N N
101 C4G O4G C O sing 1.43 N N
102 C4G H4G C H sing 1.09 N N
103 C5G C6G C C sing 1.53 N N
104 C5G O5G C O sing 1.43 N N
105 C5G H5G C H sing 1.09 N N
106 C6G O6G C O sing 1.43 N N
107 C6G H6G1 C H sing 1.09 N N
108 C6G H6G2 C H sing 1.09 N N
109 O1G H3 O H sing 0.97 N N
110 O2G H2 O H sing 0.97 N N
111 O3G H1 O H sing 0.97 N N
112 O6G H6G O H sing 0.97 N N