Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : AVL    

Bonds between two atoms of the molecule

Total Number of Bonds: 36


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CAQ CAO C C sing 1.53 N N
2 OAE CAD O C doub 1.21 N N
3 CAC CAB C C sing 1.53 N N
4 CAO CAP C C sing 1.53 N N
5 CAO CAN C C sing 1.51 N N
6 CAD CAF C C sing 1.41 N N
7 CAD CAB C C sing 1.51 N N
8 CAN CAF C C sing 1.41 N Y
9 CAN NAM C N doub 1.31 N Y
10 CAF CAG C C doub 1.41 N Y
11 NAM NAL N N sing 1.4 N Y
12 CAB CAA C C sing 1.53 N N
13 CAG NAL C N sing 1.36 N Y
14 CAG CAH C C sing 1.4 N Y
15 NAL CAK N C sing 1.36 N Y
16 CAH CAI C C doub 1.37 N Y
17 CAK CAJ C C doub 1.35 N Y
18 CAI CAJ C C sing 1.4 N Y
19 CAA H1 C H sing 1.09 N N
20 CAA H2 C H sing 1.09 N N
21 CAA H3 C H sing 1.09 N N
22 CAB H4 C H sing 1.09 N N
23 CAC H5 C H sing 1.09 N N
24 CAC H6 C H sing 1.09 N N
25 CAC H7 C H sing 1.09 N N
26 CAH H8 C H sing 1.08 N N
27 CAI H9 C H sing 1.08 N N
28 CAJ H10 C H sing 1.08 N N
29 CAK H11 C H sing 1.08 N N
30 CAO H12 C H sing 1.09 N N
31 CAQ H13 C H sing 1.09 N N
32 CAQ H14 C H sing 1.09 N N
33 CAQ H15 C H sing 1.09 N N
34 CAP H16 C H sing 1.09 N N
35 CAP H17 C H sing 1.09 N N
36 CAP H18 C H sing 1.09 N N