Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : B2B    

Bonds between two atoms of the molecule

Total Number of Bonds: 99


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.48 N N
2 C1 O1 C O sing 1.35 N N
3 C2 C5 C C sing 1.51 N N
4 O2 C1 O C doub 1.21 N N
5 C3 C2 C C doub 1.34 N N
6 C3 C6 C C sing 1.51 Z N
7 C4 C3 C C sing 1.48 N N
8 C4 O3 C O sing 1.35 N N
9 O4 C8 O C sing 1.34 N N
10 O4 C9 O C sing 1.45 N N
11 O5 C6 O C sing 1.43 N N
12 C6 C7 C C sing 1.53 N N
13 C7 C8 C C sing 1.51 N N
14 O7 C11 O C sing 1.43 N N
15 C8 O6 C O doub 1.21 N N
16 O8 C13 O C doub 1.21 N N
17 C9 C10 C C sing 1.53 N N
18 O9 C15 O C sing 1.43 N N
19 C10 C11 C C sing 1.53 N N
20 C11 C12 C C sing 1.53 N N
21 C12 C13 C C sing 1.51 N N
22 C13 C14 C C sing 1.51 N N
23 O13 C4 O C doub 1.21 N N
24 C14 C15 C C sing 1.53 N N
25 C14 C23 C C sing 1.53 N N
26 C15 C16 C C sing 1.53 N N
27 C16 C17 C C sing 1.53 N N
28 C17 C18 C C sing 1.53 N N
29 C18 C19 C C sing 1.53 N N
30 C19 C20 C C sing 1.53 N N
31 C20 C25 C C sing 1.53 N N
32 C20 C26 C C sing 1.53 N N
33 C21 C9 C C sing 1.53 N N
34 C22 C10 C C sing 1.53 N N
35 C24 C18 C C sing 1.53 N N
36 C27 C26 C C sing 1.53 N N
37 C27 C28 C C sing 1.51 N N
38 C29 C28 C C doub 1.33 N N
39 C29 C30 C C sing 1.46 N N
40 C30 C31 C C doub 1.35 N N
41 C31 C34 C C sing 1.42 N N
42 C32 C29 C C sing 1.51 N N
43 C33 C32 C C sing 1.53 N N
44 C34 O11 C O sing 1.35 N N
45 C34 O12 C O doub 1.22 N N
46 O1 HO1 O H sing 0.97 N N
47 O3 HO3 O H sing 0.97 N N
48 C5 H5 C H sing 1.09 N N
49 C5 H5A C H sing 1.09 N N
50 C5 H5B C H sing 1.09 N N
51 O5 HO5 O H sing 0.97 N N
52 C6 H6 C H sing 1.09 N N
53 C7 H7 C H sing 1.09 N N
54 C7 H7A C H sing 1.09 N N
55 O7 HO7 O H sing 0.97 N N
56 C9 H9 C H sing 1.09 N N
57 O9 HO9 O H sing 0.97 N N
58 C10 H10 C H sing 1.09 N N
59 C11 H11 C H sing 1.09 N N
60 O11 HO11 O H sing 0.97 N N
61 C12 H12 C H sing 1.09 N N
62 C12 H12A C H sing 1.09 N N
63 C14 H14 C H sing 1.09 N N
64 C15 H15 C H sing 1.09 N N
65 C16 H16 C H sing 1.09 N N
66 C16 H16A C H sing 1.09 N N
67 C17 H17 C H sing 1.09 N N
68 C17 H17A C H sing 1.09 N N
69 C18 H18 C H sing 1.09 N N
70 C19 H19 C H sing 1.09 N N
71 C19 H19A C H sing 1.09 N N
72 C20 H20 C H sing 1.09 N N
73 C21 H21 C H sing 1.09 N N
74 C21 H21A C H sing 1.09 N N
75 C21 H21B C H sing 1.09 N N
76 C22 H22 C H sing 1.09 N N
77 C22 H22A C H sing 1.09 N N
78 C22 H22B C H sing 1.09 N N
79 C23 H23 C H sing 1.09 N N
80 C23 H23A C H sing 1.09 N N
81 C23 H23B C H sing 1.09 N N
82 C24 H24 C H sing 1.09 N N
83 C24 H24A C H sing 1.09 N N
84 C24 H24B C H sing 1.09 N N
85 C25 H25 C H sing 1.09 E N
86 C25 H25A C H sing 1.09 N N
87 C25 H25B C H sing 1.09 E N
88 C26 H26 C H sing 1.09 N N
89 C26 H26A C H sing 1.09 N N
90 C27 H27 C H sing 1.09 N N
91 C27 H27A C H sing 1.09 N N
92 C28 H28 C H sing 1.08 N N
93 C30 H30 C H sing 1.08 N N
94 C31 H31 C H sing 1.08 N N
95 C32 H32 C H sing 1.09 N N
96 C32 H51 C H sing 1.09 N N
97 C33 H33 C H sing 1.09 N N
98 C33 H33A C H sing 1.09 N N
99 C33 H54 C H sing 1.09 N N