Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
B6B
Bonds between two atoms of the molecule
Total Number of Bonds: 41
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
NAM
CAF
N
C
doub
1.32
N
Y
2
NAM
CAJ
N
C
sing
1.32
N
Y
3
CAF
CAE
C
C
sing
1.38
N
Y
4
CAJ
CAT
C
C
doub
1.4
N
Y
5
NAB
CAR
N
C
sing
1.4
N
N
6
CAE
CAG
C
C
doub
1.38
N
Y
7
CAT
CAG
C
C
sing
1.4
N
Y
8
CAT
CAQ
C
C
sing
1.48
N
N
9
CAR
CAL
C
C
doub
1.39
N
Y
10
CAR
CAH
C
C
sing
1.39
N
Y
11
CAL
CAW
C
C
sing
1.39
N
Y
12
CAQ
OAD
C
O
doub
1.22
N
N
13
CAQ
CAX
C
C
sing
1.48
N
N
14
CAH
CAI
C
C
doub
1.38
N
Y
15
NAO
CAX
N
C
doub
1.33
N
Y
16
NAO
CAU
N
C
sing
1.33
N
Y
17
CAX
CAS
C
C
sing
1.41
N
Y
18
CAW
CAU
C
C
sing
1.48
N
N
19
CAW
CAV
C
C
doub
1.4
N
Y
20
CAU
CAK
C
C
doub
1.4
N
Y
21
CAS
NAC
C
N
sing
1.38
N
N
22
CAS
NAN
C
N
doub
1.33
N
Y
23
CAI
CAV
C
C
sing
1.39
N
Y
24
CAV
OAP
C
O
sing
1.36
N
N
25
CAK
NAN
C
N
sing
1.32
N
Y
26
OAP
CAA
O
C
sing
1.43
N
N
27
CAA
H1
C
H
sing
1.09
N
N
28
CAA
H2
C
H
sing
1.09
N
N
29
CAA
H3
C
H
sing
1.09
N
N
30
CAI
H4
C
H
sing
1.08
N
N
31
CAH
H5
C
H
sing
1.08
N
N
32
NAB
H6
N
H
sing
0.97
N
N
33
NAB
H7
N
H
sing
0.97
N
N
34
CAL
H8
C
H
sing
1.08
N
N
35
CAK
H9
C
H
sing
1.08
N
N
36
NAC
H10
N
H
sing
0.97
N
N
37
NAC
H11
N
H
sing
0.97
N
N
38
CAG
H12
C
H
sing
1.08
N
N
39
CAE
H13
C
H
sing
1.08
N
N
40
CAF
H14
C
H
sing
1.08
N
N
41
CAJ
H15
C
H
sing
1.08
N
N