Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : BDM    

Bonds between two atoms of the molecule

Total Number of Bonds: 56


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N1 C2 N C sing 1.33 N Y
2 N1 C6 N C doub 1.32 N Y
3 N1 HN1 N H sing 0.97 N N
4 C2 N2 C N sing 1.38 N N
5 C2 N3 C N doub 1.32 N Y
6 N2 HN21 N H sing 0.97 N N
7 N2 HN22 N H sing 0.97 N N
8 N3 C4 N C sing 1.33 N Y
9 C4 N4 C N sing 1.39 N N
10 C4 C5 C C doub 1.4 N Y
11 N4 HN41 N H sing 0.97 N N
12 N4 HN42 N H sing 0.97 N N
13 C5 C6 C C sing 1.38 N Y
14 C5 C7 C C sing 1.51 N N
15 C6 H6 C H sing 1.08 N N
16 C7 C8 C C sing 1.51 N N
17 C7 H71 C H sing 1.09 N N
18 C7 H72 C H sing 1.09 N N
19 C8 C9 C C doub 1.38 N Y
20 C8 C13 C C sing 1.38 N Y
21 C9 C10 C C sing 1.39 N Y
22 C9 H9 C H sing 1.08 N N
23 C10 O10 C O sing 1.36 N N
24 C10 C11 C C doub 1.39 N Y
25 O10 C15 O C sing 1.43 N N
26 C11 BR11 C BR sing 1.89 N N
27 C11 C12 C C sing 1.39 N Y
28 C12 O12 C O sing 1.36 N N
29 C12 C13 C C doub 1.39 N Y
30 O12 C14 O C sing 1.43 N N
31 C13 H13 C H sing 1.08 N N
32 C14 H141 C H sing 1.09 N N
33 C14 H142 C H sing 1.09 N N
34 C14 H143 C H sing 1.09 N N
35 C15 C16 C C sing 1.53 N N
36 C15 H151 C H sing 1.09 N N
37 C15 H152 C H sing 1.09 N N
38 C16 C17 C C sing 1.53 N N
39 C16 H161 C H sing 1.09 N N
40 C16 H162 C H sing 1.09 N N
41 C17 C18 C C sing 1.53 N N
42 C17 H171 C H sing 1.09 N N
43 C17 H172 C H sing 1.09 N N
44 C18 C19 C C sing 1.53 N N
45 C18 C21 C C sing 1.51 N N
46 C18 H18 C H sing 1.09 N N
47 C19 C20 C C sing 1.53 N N
48 C19 H191 C H sing 1.09 N N
49 C19 H192 C H sing 1.09 N N
50 C20 C22 C C sing 1.51 N N
51 C20 H201 C H sing 1.09 N N
52 C20 H202 C H sing 1.09 N N
53 C21 OXV C O doub 1.28 N N
54 C21 OXW C O sing 1.28 N N
55 C22 OX5 C O doub 1.27 N N
56 C22 OX6 C O sing 1.27 N N