Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : BM1    

Bonds between two atoms of the molecule

Total Number of Bonds: 38


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 S1 C2 S C sing 1.84 N N
2 S1 C5 S C sing 1.84 N N
3 C2 C3 C C sing 1.55 N N
4 C2 H21 C H sing 1.09 N N
5 C2 H22 C H sing 1.09 N N
6 C3 N4 C N sing 1.47 N N
7 C3 H31 C H sing 1.09 N N
8 C3 H32 C H sing 1.09 N N
9 C5 N4 C N sing 1.49 N N
10 C5 C12 C C sing 1.5 N N
11 C5 C13 C C sing 1.5 N N
12 N4 C6 N C sing 1.35 N N
13 C6 OE C O doub 1.22 N N
14 C6 C7 C C sing 1.48 N N
15 C7 C12 C C doub 1.41 N Y
16 C7 C8 C C sing 1.39 N Y
17 C12 C11 C C sing 1.36 N Y
18 C8 C9 C C doub 1.38 N Y
19 C8 H81 C H sing 1.08 N N
20 C9 C10 C C sing 1.38 N Y
21 C9 H91 C H sing 1.08 N N
22 C10 C11 C C doub 1.39 N Y
23 C10 H101 C H sing 1.08 N N
24 C11 H111 C H sing 1.08 N N
25 C13 C14 C C doub 1.38 N Y
26 C13 C18 C C sing 1.38 N Y
27 C14 C15 C C sing 1.38 N Y
28 C14 H141 C H sing 1.08 N N
29 C15 CA C C sing 1.51 N N
30 C15 C16 C C doub 1.38 N Y
31 CA HA1 C H sing 1.09 N N
32 CA HA2 C H sing 1.09 N N
33 CA HA3 C H sing 1.09 N N
34 C16 C17 C C sing 1.38 N Y
35 C16 H161 C H sing 1.08 N N
36 C17 C18 C C doub 1.38 N Y
37 C17 H171 C H sing 1.08 N N
38 C18 H181 C H sing 1.08 N N