Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : C8A    

Bonds between two atoms of the molecule

Total Number of Bonds: 41


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O21 P20 O P doub 1.48 N N
2 O23 P20 O P sing 1.61 N N
3 P20 O22 P O sing 1.61 N N
4 P20 C05 P C sing 1.82 N N
5 O03 P02 O P doub 1.48 N N
6 O01 P02 O P sing 1.61 N N
7 P02 C05 P C sing 1.82 N N
8 P02 O04 P O sing 1.61 N N
9 C05 N06 C N sing 1.46 N N
10 N06 C07 N C sing 1.4 N N
11 C07 C19 C C doub 1.39 N Y
12 C07 C08 C C sing 1.39 N Y
13 C19 C18 C C sing 1.38 N Y
14 C08 C09 C C doub 1.38 N Y
15 C18 C10 C C doub 1.38 N Y
16 C09 C10 C C sing 1.38 N Y
17 C10 C11 C C sing 1.51 N N
18 C11 C12 C C sing 1.51 N N
19 C17 C12 C C doub 1.38 N Y
20 C17 C16 C C sing 1.38 N Y
21 C12 C13 C C sing 1.38 N Y
22 C16 C15 C C doub 1.38 N Y
23 C13 C14 C C doub 1.38 N Y
24 C15 C14 C C sing 1.38 N Y
25 C13 H1 C H sing 1.08 N N
26 C15 H2 C H sing 1.08 N N
27 C17 H3 C H sing 1.08 N N
28 O01 H4 O H sing 0.97 N N
29 O04 H5 O H sing 0.97 N N
30 C05 H6 C H sing 1.09 N N
31 N06 H7 N H sing 0.97 N N
32 C08 H8 C H sing 1.08 N N
33 C09 H9 C H sing 1.08 N N
34 C11 H10 C H sing 1.09 N N
35 C11 H11 C H sing 1.09 N N
36 C14 H12 C H sing 1.08 N N
37 C16 H13 C H sing 1.08 N N
38 C18 H14 C H sing 1.08 N N
39 C19 H15 C H sing 1.08 N N
40 O22 H16 O H sing 0.97 N N
41 O23 H17 O H sing 0.97 N N