Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : CC0    

Bonds between two atoms of the molecule

Total Number of Bonds: 83


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 P1 OR1 P O sing 1.48 N N
2 P1 OR2 P O doub 1.61 N N
3 P1 O10 P O sing 1.61 N N
4 P1 C8 P C sing 1.81 N N
5 OR1 HR1 O H sing N N
6 O10 H10 O H sing 0.97 N N
7 C1 N1 C N sing 1.47 N N
8 C1 C11 C C sing 1.53 N N
9 C1 C14 C C sing 1.51 N N
10 C1 HC11 C H sing 1.09 N N
11 N1 C3 N C sing 1.35 N N
12 N1 HN11 N H sing 0.97 N N
13 C0 C3 C C sing 1.51 N N
14 C0 N2 C N sing 1.47 N N
15 C0 C4 C C sing 1.53 N N
16 C0 HC01 C H sing 1.09 N N
17 C3 O2 C O doub 1.21 N N
18 N2 C12 N C sing 1.35 N N
19 N2 HN21 N H sing 0.97 N N
20 C4 C5 C C sing 1.51 N N
21 C4 HC41 C H sing 1.09 N N
22 C4 HC42 C H sing 1.09 N N
23 C5 C6 C C doub 1.38 N Y
24 C5 C7 C C sing 1.38 N Y
25 C6 C8 C C sing 1.38 N Y
26 C6 HC61 C H sing 1.08 N N
27 C7 C9 C C doub 1.38 N Y
28 C7 HC71 C H sing 1.08 N N
29 C8 C10 C C doub 1.39 N Y
30 C9 C10 C C sing 1.39 N Y
31 C9 HC91 C H sing 1.08 N N
32 C10 O3 C O sing 1.36 N N
33 O3 C28 O C sing 1.43 N N
34 C11 H111 C H sing 1.09 N N
35 C11 H112 C H sing 1.09 N N
36 C11 H113 C H sing 1.09 N N
37 C12 C13 C C sing 1.51 N N
38 C12 O4 C O doub 1.21 N N
39 C13 H131 C H sing 1.09 N N
40 C13 H132 C H sing 1.09 N N
41 C13 H133 C H sing 1.09 N N
42 O5 C17 O C sing 1.36 N N
43 O5 C20 O C sing 1.43 N N
44 C14 C15 C C doub 1.38 N Y
45 C14 C19 C C sing 1.39 N Y
46 C15 C16 C C sing 1.4 N Y
47 C15 H151 C H sing 1.08 N N
48 C16 C17 C C doub 1.4 N Y
49 C16 C27 C C sing 1.48 N N
50 C17 C18 C C sing 1.39 N Y
51 C18 C19 C C doub 1.38 N Y
52 C18 H181 C H sing 1.08 N N
53 C19 H191 C H sing 1.08 N N
54 C20 C21 C C sing 1.53 N N
55 C20 H201 C H sing 1.09 N N
56 C20 H202 C H sing 1.09 N N
57 C21 C22 C C sing 1.53 N N
58 C21 C26 C C sing 1.53 N N
59 C21 H211 C H sing 1.09 N N
60 C22 C23 C C sing 1.53 N N
61 C22 H221 C H sing 1.09 N N
62 C22 H222 C H sing 1.09 N N
63 C23 C24 C C sing 1.53 N N
64 C23 H231 C H sing 1.09 N N
65 C23 H232 C H sing 1.09 N N
66 C24 C25 C C sing 1.53 N N
67 C24 H241 C H sing 1.09 N N
68 C24 H242 C H sing 1.09 N N
69 C25 C26 C C sing 1.53 N N
70 C25 H251 C H sing 1.09 N N
71 C25 H252 C H sing 1.09 N N
72 C26 H261 C H sing 1.09 N N
73 C26 H262 C H sing 1.09 N N
74 C27 N3 C N sing 1.35 N N
75 C27 O6 C O doub 1.22 N N
76 N3 HN31 N H sing 0.97 N N
77 N3 HN32 N H sing 0.97 N N
78 C28 C29 C C sing 1.51 N N
79 C28 H281 C H sing 1.09 N N
80 C28 H282 C H sing 1.09 N N
81 C29 O7 C O doub 1.34 N N
82 C29 O8 C O sing 1.21 N N
83 O8 HXT O H sing N N