Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : CDO    

Bonds between two atoms of the molecule

Total Number of Bonds: 67


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C doub 1.39 N Y
2 C1 C6 C C sing 1.38 N Y
3 C1 H1 C H sing 1.08 N N
4 C2 N3 C N sing 1.33 N Y
5 C2 C8 C C sing 1.48 N N
6 N3 C4 N C doub 1.32 N Y
7 C4 C5 C C sing 1.38 N Y
8 C4 H4 C H sing 1.08 N N
9 C5 C6 C C doub 1.39 N Y
10 C5 C7 C C sing 1.51 N N
11 C6 H6 C H sing 1.08 N N
12 C7 N11 C N sing 1.47 N N
13 C7 H71 C H sing 1.09 N N
14 C7 H72 C H sing 1.09 N N
15 C8 N9 C N doub 1.3 Z N
16 C8 N10 C N sing 1.38 N N
17 N9 HN9 N H sing 0.97 N N
18 N10 H101 N H sing 0.97 N N
19 N10 H102 N H sing 0.97 N N
20 N11 C12 N C sing 1.35 N N
21 N11 H11 N H sing 0.97 N N
22 C12 C13 C C sing 1.51 N N
23 C12 O14 C O doub 1.21 N N
24 C13 C15 C C sing 1.51 N N
25 C13 N18 C N sing 1.47 N N
26 C13 H13 C H sing 1.09 N N
27 C15 C16 C C doub 1.3 N N
28 C15 H15 C H sing 1.08 N N
29 C16 C17 C C sing 1.51 N N
30 C16 H16 C H sing 1.08 N N
31 C17 N18 C N sing 1.47 N N
32 C17 H171 C H sing 1.09 N N
33 C17 H172 C H sing 1.09 N N
34 N18 C19 N C sing 1.35 N N
35 C19 C20 C C sing 1.51 N N
36 C19 O21 C O doub 1.21 N N
37 C20 N22 C N sing 1.47 N N
38 C20 C27 C C sing 1.53 N N
39 C20 H20 C H sing 1.09 N N
40 N22 C23 N C sing 1.47 N N
41 N22 H22 N H sing 1.01 N N
42 C23 C24 C C sing 1.51 N N
43 C23 H231 C H sing 1.09 N N
44 C23 H232 C H sing 1.09 N N
45 C24 O25 C O sing 1.34 N N
46 C24 O26 C O doub 1.21 N N
47 O25 H25 O H sing 0.97 N N
48 C27 C28 C C sing 1.53 N N
49 C27 H271 C H sing 1.09 N N
50 C27 H272 C H sing 1.09 N N
51 C28 C29 C C sing 1.53 N N
52 C28 C33 C C sing 1.53 N N
53 C28 H28 C H sing 1.09 N N
54 C29 C30 C C sing 1.53 N N
55 C29 H291 C H sing 1.09 N N
56 C29 H292 C H sing 1.09 N N
57 C30 C31 C C sing 1.53 N N
58 C30 H301 C H sing 1.09 N N
59 C30 H302 C H sing 1.09 N N
60 C31 C32 C C sing 1.53 N N
61 C31 H311 C H sing 1.09 N N
62 C31 H312 C H sing 1.09 N N
63 C32 C33 C C sing 1.53 N N
64 C32 H321 C H sing 1.09 N N
65 C32 H322 C H sing 1.09 N N
66 C33 H331 C H sing 1.09 N N
67 C33 H332 C H sing 1.09 N N