Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : CI9    

Bonds between two atoms of the molecule

Total Number of Bonds: 99


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OAA CBN O C sing 1.34 N N
2 CBN OAG C O doub 1.21 N N
3 CBN CAZ C C sing 1.51 N N
4 CAZ CBB C C sing 1.53 N N
5 CBB CBW C C sing 1.53 N N
6 CBW CBP C C sing 1.51 N N
7 CBW NBI C N sing 1.46 N N
8 CBP OAI C O sing 1.34 N N
9 CBP OAC C O doub 1.21 N N
10 NBI CBQ N C sing 1.35 N N
11 CBQ OAD C O doub 1.22 N N
12 CBQ N C N sing 1.35 N N
13 N CA N C sing 1.46 N N
14 CA C C C sing 1.51 N N
15 CA CB C C sing 1.53 N N
16 C O C O doub 1.34 N N
17 C OXT C O sing 1.21 N N
18 CB CAP C C sing 1.53 N N
19 CAP CAQ C C sing 1.53 N N
20 CAQ CBC C C sing 1.53 N N
21 CBC NBX C N sing 1.46 N N
22 NBX CAO N C sing 1.35 N Y
23 NBX NBF N N sing 1.29 N Y
24 CAO CBR C C doub 1.35 N Y
25 NBF NBE N N doub 1.29 N Y
26 NBE CBR N C sing 1.34 N Y
27 CBR CBD C C sing 1.51 N N
28 CBD OBM C O sing 1.43 N N
29 OBM CAY O C sing 1.43 N N
30 CAY CAX C C sing 1.53 N N
31 CAX OBL C O sing 1.43 N N
32 OBL CAW O C sing 1.43 N N
33 CAW CAV C C sing 1.53 N N
34 CAV OBK C O sing 1.43 N N
35 OBK CAU O C sing 1.43 N N
36 CAU CAT C C sing 1.53 N N
37 CAT OBJ C O sing 1.43 N N
38 OBJ CAS O C sing 1.43 N N
39 CAS CAR C C sing 1.53 N N
40 CAR NBG C N sing 1.47 N N
41 NBG CBT N C sing 1.4 N N
42 CBT CAM C C sing 1.39 N Y
43 CBT CBU C C doub 1.39 N Y
44 CAM CAL C C doub 1.38 N Y
45 CAL CBS C C sing 1.39 N Y
46 CBS NBY C N sing 1.4 N N
47 CBS CAN C C doub 1.39 N Y
48 NBY OAJ N O sing 1.42 N N
49 NBY OAE N O sing 1.42 N N
50 CAN CBU C C sing 1.39 N Y
51 CBU NBZ C N sing 1.4 N N
52 NBZ OAK N O sing 1.46 N N
53 NBZ OAF N O sing 1.46 N N
54 OAA HAA O H sing 0.97 N N
55 CAZ HAZ1 C H sing 1.09 N N
56 CAZ HAZ2 C H sing 1.09 N N
57 CBB HBB1 C H sing 1.09 N N
58 CBB HBB2 C H sing 1.09 N N
59 CBW HBW C H sing 1.09 N N
60 NBI HBI N H sing 0.97 N N
61 OAI HAI O H sing 0.97 N N
62 N H N H sing 0.97 N N
63 CA HA C H sing 1.09 N N
64 CB HB1C C H sing 1.09 N N
65 CB HB2C C H sing 1.09 N N
66 OXT HXT O H sing 2.39 N N
67 CAP HAP1 C H sing 1.09 N N
68 CAP HAP2 C H sing 1.09 N N
69 CAQ HAQ1 C H sing 1.09 N N
70 CAQ HAQ2 C H sing 1.09 N N
71 CBC HBC1 C H sing 1.09 N N
72 CBC HBC2 C H sing 1.09 N N
73 CAO HAO C H sing 1.08 N N
74 CBD HBD1 C H sing 1.09 N N
75 CBD HBD2 C H sing 1.09 N N
76 CAY HAY1 C H sing 1.09 N N
77 CAY HAY2 C H sing 1.09 N N
78 CAX HAX1 C H sing 1.09 N N
79 CAX HAX2 C H sing 1.09 N N
80 CAW HAW1 C H sing 1.09 N N
81 CAW HAW2 C H sing 1.09 N N
82 CAV HAV1 C H sing 1.09 N N
83 CAV HAV2 C H sing 1.09 N N
84 CAU HAU1 C H sing 1.09 N N
85 CAU HAU2 C H sing 1.09 N N
86 CAT HAT1 C H sing 1.09 N N
87 CAT HAT2 C H sing 1.09 N N
88 CAS HAS1 C H sing 1.09 N N
89 CAS HAS2 C H sing 1.09 N N
90 CAR HAR1 C H sing 1.09 N N
91 CAR HAR2 C H sing 1.09 N N
92 NBG HBG N H sing 0.97 N N
93 CAM HAM C H sing 1.08 N N
94 CAL HAL C H sing 1.08 N N
95 CAN HAN C H sing 1.08 N N
96 OAE HAE O H sing 0.97 N N
97 OAJ HAJ O H sing 0.97 N N
98 OAK HAK O H sing 0.97 N N
99 OAF HAF O H sing 0.97 N N