Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : D34    

Bonds between two atoms of the molecule

Total Number of Bonds: 67


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C7 N2 C N sing 1.47 N N
2 C7 N1 C N sing 1.47 N N
3 C7 C4 C C sing 1.51 N N
4 C7 H77 C H sing 1.09 N N
5 N2 C8 N C sing 1.47 N N
6 N2 HN2 N H sing 1.01 N N
7 N1 HN1 N H sing 1.01 N N
8 N1 HN2A N H sing 1.01 N N
9 C8 C9 C C sing 1.54 N N
10 C8 C11 C C sing 1.54 N N
11 C8 H8 C H sing 1.09 N N
12 C9 C10 C C sing 1.54 N N
13 C9 H91 C H sing 1.09 N N
14 C9 H92 C H sing 1.09 N N
15 C10 C11 C C sing 1.54 N N
16 C10 H01 C H sing 1.09 N N
17 C10 H02 C H sing 1.09 N N
18 C11 H11 C H sing 1.09 N N
19 C11 H12 C H sing 1.09 N N
20 C1 C2 C C doub 1.4 N Y
21 C1 C6 C C sing 1.4 N Y
22 C1 CA C C sing 1.48 N Y
23 C2 C3 C C sing 1.38 N Y
24 C2 H2 C H sing 1.08 N N
25 C3 C4 C C doub 1.38 N Y
26 C3 H3 C H sing 1.08 N N
27 C4 C5 C C sing 1.38 N Y
28 C5 C6 C C doub 1.38 N Y
29 C5 H5 C H sing 1.08 N N
30 C6 H6 C H sing 1.08 N N
31 CA O1 C O sing 1.35 N Y
32 CA CB C C doub 1.36 N Y
33 O1 CA' O C sing 1.35 N Y
34 CB CB' C C sing 1.4 N Y
35 CB HB C H sing 1.08 N N
36 CB' CA' C C doub 1.36 N Y
37 CB' HB' C H sing 1.08 N N
38 CA' C1' C C sing 1.48 N Y
39 C1' C2' C C doub 1.4 N Y
40 C1' C6' C C sing 1.4 N Y
41 C2' C3' C C sing 1.38 N Y
42 C2' H2' C H sing 1.08 N N
43 C3' C4' C C doub 1.38 N Y
44 C3' H3' C H sing 1.08 N N
45 C4' C5' C C sing 1.38 N Y
46 C4' C7' C C sing 1.51 N N
47 C5' C6' C C doub 1.38 N Y
48 C5' H5' C H sing 1.08 N N
49 C6' H6' C H sing 1.08 N N
50 C7' N2' C N sing 1.47 N N
51 C7' N1' C N sing 1.47 N N
52 C7' H7B C H sing 1.09 N N
53 N2' C8' N C sing 1.47 N N
54 N2' HN2' N H sing 1.01 N N
55 N1' HN'1 N H sing 1.01 N N
56 N1' HN'2 N H sing 1.01 N N
57 C8' C9' C C sing 1.54 N N
58 C8' CBX C C sing 1.54 N N
59 C8' H8' C H sing 1.09 N N
60 C9' CAX C C sing 1.54 N N
61 C9' H9'1 C H sing 1.09 N N
62 C9' H9'2 C H sing 1.09 N N
63 CAX CBX C C sing 1.54 N N
64 CAX H0'1 C H sing 1.09 N N
65 CAX H0'2 C H sing 1.09 N N
66 CBX H1'1 C H sing 1.09 N N
67 CBX H1'2 C H sing 1.09 N N