Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : D9S    

Bonds between two atoms of the molecule

Total Number of Bonds: 63


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C4 C3 C C doub 1.38 N Y
2 C4 C5 C C sing 1.38 N Y
3 C3 C2 C C sing 1.38 N Y
4 C5 C6 C C doub 1.38 N Y
5 C2 C1 C C sing 1.51 N N
6 C2 C7 C C doub 1.38 N Y
7 C1 N C N sing 1.47 N N
8 C6 C7 C C sing 1.38 N Y
9 N C N C sing 1.47 N N
10 N C8 N C sing 1.47 N N
11 C8 C9 C C sing 1.51 N N
12 C9 C10 C C doub 1.35 N Y
13 C9 O C O sing 1.34 N Y
14 C10 C11 C C sing 1.41 N Y
15 O N1 O N sing 1.21 N Y
16 C11 N1 C N doub 1.3 N Y
17 C11 C12 C C sing 1.51 N N
18 C12 C13 C C sing 1.53 N N
19 C13 C14 C C sing 1.53 N N
20 C13 C17 C C sing 1.53 N N
21 C14 N2 C N sing 1.47 N N
22 C17 C18 C C sing 1.53 N N
23 C17 C16 C C sing 1.53 N N
24 N2 C15 N C sing 1.47 N N
25 C18 C19 C C sing 1.51 N N
26 C16 C15 C C sing 1.53 N N
27 O1 C19 O C doub 1.21 N N
28 C19 N3 C N sing 1.35 N N
29 N3 C20 N C sing 1.39 N N
30 S C20 S C sing 1.71 N Y
31 S C22 S C sing 1.76 N Y
32 C20 N4 C N doub 1.3 N Y
33 C22 C21 C C doub 1.33 N Y
34 N4 C21 N C sing 1.32 N Y
35 C4 H1 C H sing 1.08 N N
36 C5 H2 C H sing 1.08 N N
37 C6 H3 C H sing 1.08 N N
38 C7 H4 C H sing 1.08 N N
39 C8 H5 C H sing 1.09 N N
40 C8 H6 C H sing 1.09 N N
41 N2 H7 N H sing 1.01 N N
42 C10 H9 C H sing 1.08 N N
43 C12 H10 C H sing 1.09 N N
44 C12 H11 C H sing 1.09 N N
45 N3 H12 N H sing 0.97 N N
46 C13 H13 C H sing 1.09 N N
47 C14 H14 C H sing 1.09 N N
48 C14 H15 C H sing 1.09 N N
49 C15 H16 C H sing 1.09 N N
50 C15 H17 C H sing 1.09 N N
51 C22 H18 C H sing 1.08 N N
52 C21 H19 C H sing 1.08 N N
53 C18 H20 C H sing 1.09 N N
54 C18 H21 C H sing 1.09 N N
55 C17 H22 C H sing 1.09 N N
56 C16 H23 C H sing 1.09 N N
57 C16 H24 C H sing 1.09 N N
58 C H26 C H sing 1.09 N N
59 C H27 C H sing 1.09 N N
60 C H28 C H sing 1.09 N N
61 C1 H29 C H sing 1.09 N N
62 C1 H30 C H sing 1.09 N N
63 C3 H31 C H sing 1.08 N N