Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : DFN    

Bonds between two atoms of the molecule

Total Number of Bonds: 53


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C28 N22 C N sing 1.46 N N
2 C28 H281 C H sing 1.09 N N
3 C28 H282 C H sing 1.09 N N
4 C28 H283 C H sing 1.09 N N
5 N22 C48 N C sing 1.36 N Y
6 N22 C21 N C sing 1.38 N Y
7 C48 C19 C C doub 1.38 N Y
8 C48 H48 C H sing 1.08 N N
9 C21 C24 C C doub 1.39 N Y
10 C21 C20 C C sing 1.4 N Y
11 C24 C31 C C sing 1.38 N Y
12 C24 H24 C H sing 1.08 N N
13 C31 C29 C C doub 1.39 N Y
14 C31 H31 C H sing 1.08 N N
15 C29 F39 C F sing 1.35 N N
16 C29 C23 C C sing 1.38 N Y
17 C20 C23 C C doub 1.39 N Y
18 C20 C19 C C sing 1.47 N Y
19 C23 H23 C H sing 1.08 N N
20 C19 C01 C C sing 1.47 N N
21 C01 C02 C C doub 1.39 N N
22 C01 C05 C C sing 1.48 N N
23 C02 C03 C C sing 1.47 N N
24 C02 C08 C C sing 1.48 N N
25 C03 O06 C O doub 1.21 N N
26 C03 N04 C N sing 1.34 N N
27 N04 C05 N C sing 1.34 N N
28 N04 H04 N H sing 0.97 N N
29 C05 O07 C O doub 1.21 N N
30 C08 C09 C C doub 1.4 N Y
31 C08 C13 C C sing 1.4 N Y
32 C09 C10 C C sing 1.39 N Y
33 C09 H09 C H sing 1.08 N N
34 C10 C11 C C doub 1.39 N Y
35 C10 N15 C N sing 1.4 N N
36 C11 C12 C C sing 1.38 N Y
37 C11 H11 C H sing 1.08 N N
38 C12 C13 C C doub 1.38 N Y
39 C12 H12 C H sing 1.08 N N
40 C13 H13 C H sing 1.08 N N
41 N15 C26 N C sing 1.47 N N
42 N15 H15 N H sing 0.97 N N
43 C26 C34 C C sing 1.53 N N
44 C26 H261 C H sing 1.09 N N
45 C26 H262 C H sing 1.09 N N
46 C34 O41 C O sing 1.43 N N
47 C34 C40 C C sing 1.53 N N
48 C34 H34 C H sing 1.09 N N
49 O41 H41 O H sing 0.97 N N
50 C40 O45 C O sing 1.43 N N
51 C40 H401 C H sing 1.09 N N
52 C40 H402 C H sing 1.09 N N
53 O45 H45 O H sing 0.97 N N