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Representative
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mmCif
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1DG
(Stereoisomer)
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PDBeChem : Chemical Bonds
Molecule :
DG1
Bonds between two atoms of the molecule
Total Number of Bonds: 94
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
CAT
CAR
C
C
sing
1.38
N
Y
2
CAT
CBN
C
C
doub
1.4
N
Y
3
CAT
HAT
C
H
sing
1.08
N
N
4
CAR
NAZ
C
N
doub
1.32
N
Y
5
CAR
HAR
C
H
sing
1.08
N
N
6
NAZ
CAS
N
C
sing
1.32
N
Y
7
CAS
CAU
C
C
doub
1.38
N
Y
8
CAS
HAS
C
H
sing
1.08
N
N
9
CAU
CBN
C
C
sing
1.4
N
Y
10
CAU
HAU
C
H
sing
1.08
N
N
11
CBN
CBK
C
C
sing
1.48
N
N
12
CBK
OAD
C
O
doub
1.21
N
N
13
CBK
CBT
C
C
sing
1.51
N
N
14
CBT
CBL
C
C
sing
1.5
N
N
15
CBT
CAO
C
C
sing
1.5
N
N
16
CBT
HBT
C
H
sing
1.09
N
N
17
CBL
CBJ
C
C
sing
1.42
N
N
18
CBL
CAQ
C
C
doub
1.35
N
N
19
CAQ
NBZ
C
N
sing
1.37
N
N
20
CAQ
HAQ
C
H
sing
1.08
N
N
21
CBJ
OAC
C
O
doub
1.22
N
N
22
CBJ
NAA
C
N
sing
1.35
N
N
23
NAA
HAA1
N
H
sing
0.97
N
N
24
NAA
HAA2
N
H
sing
0.97
N
N
25
CAO
CAP
C
C
doub
1.31
N
N
26
CAO
HAO
C
H
sing
1.08
N
N
27
CAP
NBZ
C
N
sing
1.39
N
N
28
CAP
HAP
C
H
sing
1.08
N
N
29
NBZ
C1'
N
C
sing
1.46
N
N
30
C1'
C2'
C
C
sing
1.55
N
N
31
C1'
O4'
C
O
sing
1.44
N
N
32
C1'
H1'
C
H
sing
1.09
N
N
33
O4'
C4'
O
C
sing
1.44
N
N
34
C2'
O2'
C
O
sing
1.43
N
N
35
C2'
C3'
C
C
sing
1.55
N
N
36
C2'
H2'
C
H
sing
1.09
N
N
37
O2'
HO2'
O
H
sing
0.97
N
N
38
C3'
C4'
C
C
sing
1.54
N
N
39
C3'
O3'
C
O
sing
1.43
N
N
40
C3'
H3'
C
H
sing
1.09
N
N
41
O3'
HO3'
O
H
sing
0.97
N
N
42
C4'
C5'
C
C
sing
1.53
N
N
43
C4'
H4'
C
H
sing
1.09
N
N
44
C5'
O5'
C
O
sing
1.43
N
N
45
C5'
H5'1
C
H
sing
1.09
N
N
46
C5'
H5'2
C
H
sing
1.09
N
N
47
O5'
PCC
O
P
sing
1.61
N
N
48
PCC
OAF
P
O
doub
1.48
N
N
49
PCC
OAM
P
O
sing
1.61
N
N
50
PCC
OBI
P
O
sing
1.61
N
N
51
OAM
HOAM
O
H
sing
0.97
N
N
52
OBI
PCD
O
P
sing
1.61
N
N
53
PCD
OAG
P
O
doub
1.48
N
N
54
PCD
OAN
P
O
sing
1.61
N
N
55
PCD
OBE
P
O
sing
1.61
N
N
56
OAN
HOAN
O
H
sing
0.97
N
N
57
OBE
CAY
O
C
sing
1.43
N
N
58
CAY
CBV
C
C
sing
1.53
N
N
59
CAY
HAY1
C
H
sing
1.09
N
N
60
CAY
HAY2
C
H
sing
1.09
N
N
61
CBV
CBS
C
C
sing
1.54
N
N
62
CBV
OBG
C
O
sing
1.44
N
N
63
CBV
HBV
C
H
sing
1.09
N
N
64
OBG
CBY
O
C
sing
1.44
N
N
65
CBS
OAJ
C
O
sing
1.43
N
N
66
CBS
CBW
C
C
sing
1.54
N
N
67
CBS
HBS
C
H
sing
1.09
N
N
68
OAJ
HOAJ
O
H
sing
0.97
N
N
69
CBW
OBH
C
O
sing
1.43
N
N
70
CBW
CBY
C
C
sing
1.54
N
N
71
CBW
HBW
C
H
sing
1.09
N
N
72
OBH
PCB
O
P
sing
1.61
N
N
73
PCB
OAE
P
O
doub
1.48
N
N
74
PCB
OAL
P
O
sing
1.61
N
N
75
PCB
OAK
P
O
sing
1.61
N
N
76
OAK
HOAK
O
H
sing
0.97
N
N
77
OAL
HOAL
O
H
sing
0.97
N
N
78
CBY
N9
C
N
sing
1.47
N
N
79
CBY
HBY
C
H
sing
1.09
N
N
80
N9
C8
N
C
sing
1.36
N
Y
81
N9
C4
N
C
sing
1.37
N
Y
82
C8
N7
C
N
doub
1.3
N
Y
83
C8
H8
C
H
sing
1.08
N
N
84
N7
C5
N
C
sing
1.35
N
Y
85
C5
C4
C
C
doub
1.4
N
Y
86
C5
C6
C
C
sing
1.41
N
Y
87
C4
N3
C
N
sing
1.33
N
Y
88
N3
C2
N
C
doub
1.32
N
Y
89
C2
N1
C
N
sing
1.32
N
Y
90
C2
H2
C
H
sing
1.08
N
N
91
N1
C6
N
C
doub
1.33
N
Y
92
C6
N6
C
N
sing
1.38
N
N
93
N6
HN61
N
H
sing
0.97
N
N
94
N6
HN62
N
H
sing
0.97
N
N