Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : DZO    

Bonds between two atoms of the molecule

Total Number of Bonds: 41


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C4 C2 C C sing 1.4 N Y
2 C4 N3 C N doub 1.31 N Y
3 C3 N4 C N sing 1.38 N N
4 C3 C5 C C sing 1.41 N Y
5 C3 N1 C N doub 1.32 N Y
6 C2 C1 C C doub 1.4 N Y
7 C2 C6 C C sing 1.48 N Y
8 C1 N1 C N sing 1.34 N Y
9 C1 N2 C N sing 1.37 N Y
10 C10 C12 C C doub 1.38 N Y
11 C10 C9 C C sing 1.39 N Y
12 C12 CL1 C CL sing 1.74 N N
13 C12 C17 C C sing 1.38 N Y
14 C17 C15 C C doub 1.38 N Y
15 C15 C16 C C sing 1.38 N Y
16 C16 C9 C C doub 1.39 N Y
17 C9 N4 C N sing 1.4 N N
18 C5 C7 C C doub 1.35 N Y
19 C7 N2 C N sing 1.37 N Y
20 N2 N3 N N sing 1.4 N Y
21 C6 C8 C C doub 1.39 N Y
22 C6 C13 C C sing 1.39 N Y
23 C8 C11 C C sing 1.39 N Y
24 C13 C14 C C doub 1.38 N Y
25 C14 C18 C C sing 1.38 N Y
26 C18 C11 C C doub 1.39 N Y
27 C11 N5 C N sing 1.4 N N
28 C4 H4 C H sing 1.08 N N
29 C10 H10 C H sing 1.08 N N
30 C17 H17 C H sing 1.08 N N
31 C15 H15 C H sing 1.08 N N
32 C16 H16 C H sing 1.08 N N
33 N4 HN4 N H sing 0.97 N N
34 C5 H5 C H sing 1.08 N N
35 C7 H7 C H sing 1.08 N N
36 C8 H8 C H sing 1.08 N N
37 C13 H13 C H sing 1.08 N N
38 C14 H14 C H sing 1.08 N N
39 C18 H18 C H sing 1.08 N N
40 N5 HN5 N H sing 0.97 N N
41 N5 HN5A N H sing 0.97 N N