Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : E5H    

Bonds between two atoms of the molecule

Total Number of Bonds: 56


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C09 C10 C C sing 1.53 N N
2 C09 C08 C C sing 1.53 N N
3 C10 C11 C C sing 1.53 N N
4 C17 C16 C C doub 1.38 N Y
5 C17 C18 C C sing 1.39 N Y
6 C08 N07 C N sing 1.47 N N
7 C16 C15 C C sing 1.39 N Y
8 C19 C18 C C sing 1.48 N N
9 C18 C25 C C doub 1.39 N Y
10 C11 C12 C C sing 1.53 N N
11 N07 C12 N C sing 1.47 N N
12 N07 C06 N C sing 1.47 N N
13 C15 O14 C O sing 1.36 N N
14 C15 C26 C C doub 1.39 N Y
15 O14 C13 O C sing 1.43 N N
16 C05 C04 C C sing 1.53 N N
17 C05 C06 C C sing 1.53 N N
18 C25 C26 C C sing 1.38 N Y
19 N03 C04 N C sing 1.46 N N
20 N03 C02 N C sing 1.35 N N
21 C13 C02 C C sing 1.51 N N
22 C02 O01 C O doub 1.21 N N
23 N03 H1 N H sing 0.97 N N
24 C04 H2 C H sing 1.09 N N
25 C04 H3 C H sing 1.09 N N
26 C05 H4 C H sing 1.09 N N
27 C05 H5 C H sing 1.09 N N
28 C06 H6 C H sing 1.09 N N
29 C06 H7 C H sing 1.09 N N
30 C08 H9 C H sing 1.09 N N
31 C08 H10 C H sing 1.09 N N
32 C09 H11 C H sing 1.09 N N
33 C09 H12 C H sing 1.09 N N
34 C10 H13 C H sing 1.09 N N
35 C10 H14 C H sing 1.09 N N
36 C11 H15 C H sing 1.09 N N
37 C11 H16 C H sing 1.09 N N
38 C12 H17 C H sing 1.09 N N
39 C12 H18 C H sing 1.09 N N
40 C13 H19 C H sing 1.09 N N
41 C13 H20 C H sing 1.09 N N
42 C16 H21 C H sing 1.08 N N
43 C17 H22 C H sing 1.08 N N
44 C25 H26 C H sing 1.08 N N
45 C26 H27 C H sing 1.08 N N
46 C19 C1 C C sing 1.39 N Y
47 C1 C2 C C doub 1.38 N Y
48 C2 C3 C C sing 1.38 N Y
49 C3 C4 C C doub 1.38 N Y
50 C4 C5 C C sing 1.38 N Y
51 C5 C19 C C doub 1.39 N Y
52 C1 H8 C H sing 1.08 N N
53 C2 H23 C H sing 1.08 N N
54 C3 H24 C H sing 1.08 N N
55 C4 H25 C H sing 1.08 N N
56 C5 H28 C H sing 1.08 N N