Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : E5R    

Bonds between two atoms of the molecule

Total Number of Bonds: 44


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O C O C sing 1.36 N N
2 O3 C15 O C doub 1.22 N N
3 C C1 C C doub 1.38 N Y
4 C C14 C C sing 1.4 N Y
5 C1 C2 C C sing 1.39 N Y
6 C15 C14 C C sing 1.48 N N
7 C15 O2 C O sing 1.36 N N
8 C14 C4 C C doub 1.4 N Y
9 C2 O1 C O sing 1.36 N N
10 C2 C3 C C doub 1.39 N Y
11 O2 C6 O C sing 1.46 N N
12 C4 C3 C C sing 1.38 N Y
13 C4 C5 C C sing 1.51 N N
14 C5 C6 C C sing 1.53 N N
15 C6 C7 C C sing 1.53 N N
16 C7 N C N sing 1.47 N N
17 N C8 N C sing 1.47 N N
18 N C13 N C sing 1.47 N N
19 C8 C9 C C sing 1.53 N N
20 C9 C10 C C sing 1.53 N N
21 C13 C11 C C sing 1.53 N N
22 C11 C10 C C sing 1.53 N N
23 C11 C12 C C sing 1.53 N N
24 O H2 O H sing 0.97 N N
25 C1 H3 C H sing 1.08 N N
26 C10 H4 C H sing 1.09 N N
27 C10 H5 C H sing 1.09 N N
28 C11 H6 C H sing 1.09 N N
29 C12 H7 C H sing 1.09 N N
30 C12 H8 C H sing 1.09 N N
31 C12 H9 C H sing 1.09 N N
32 C13 H10 C H sing 1.09 N N
33 C13 H11 C H sing 1.09 N N
34 C3 H12 C H sing 1.08 N N
35 C5 H13 C H sing 1.09 N N
36 C5 H14 C H sing 1.09 N N
37 C6 H15 C H sing 1.09 N N
38 C7 H16 C H sing 1.09 N N
39 C7 H17 C H sing 1.09 N N
40 C8 H18 C H sing 1.09 N N
41 C8 H19 C H sing 1.09 N N
42 C9 H20 C H sing 1.09 N N
43 C9 H21 C H sing 1.09 N N
44 O1 H22 O H sing 0.97 N N