Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : EDU    

Bonds between two atoms of the molecule

Total Number of Bonds: 31


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C29 C28 C C trip 1.17 N N
2 C28 C25 C C sing 1.43 N N
3 O24 C23 O C doub 1.22 N N
4 C25 C23 C C sing 1.47 N N
5 C25 C26 C C doub 1.37 N N
6 C23 N21 C N sing 1.35 N N
7 C03 O01 C O sing 1.43 N N
8 C03 C06 C C sing 1.53 N N
9 C26 N18 C N sing 1.37 N N
10 O08 C06 O C sing 1.44 N N
11 O08 C16 O C sing 1.44 N N
12 N21 C19 N C sing 1.34 N N
13 C06 C09 C C sing 1.55 N N
14 N18 C19 N C sing 1.34 N N
15 N18 C16 N C sing 1.46 N N
16 C19 O20 C O doub 1.22 N N
17 C16 C13 C C sing 1.55 N N
18 C09 C13 C C sing 1.55 N N
19 C09 O10 C O sing 1.43 N N
20 O01 H1 O H sing 0.97 N N
21 C03 H2 C H sing 1.09 N N
22 C03 H3 C H sing 1.09 N N
23 C06 H4 C H sing 1.09 N N
24 C09 H5 C H sing 1.09 N N
25 O10 H6 O H sing 0.97 N N
26 C13 H7 C H sing 1.09 N N
27 C13 H8 C H sing 1.09 N N
28 C16 H9 C H sing 1.09 N N
29 N21 H10 N H sing 0.97 N N
30 C26 H11 C H sing 1.08 N N
31 C29 H12 C H sing 1.05 N N