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PDBeChem : Chemical Bonds
Molecule :
EM9
Bonds between two atoms of the molecule
Total Number of Bonds: 96
50
10 per page
20 per page
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Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
OBH
CBG
O
C
sing
1.36
N
N
2
CBG
CBF
C
C
doub
1.38
N
Y
3
CBG
CBI
C
C
sing
1.39
N
Y
4
CBF
CBE
C
C
sing
1.39
N
Y
5
CBI
CBJ
C
C
doub
1.38
N
Y
6
CBD
CBE
C
C
sing
1.51
N
N
7
CBD
CAK
C
C
sing
1.53
N
N
8
CBE
CBK
C
C
doub
1.38
N
Y
9
CBJ
CBK
C
C
sing
1.39
N
Y
10
CBK
CBL
C
C
sing
1.5
N
N
11
C9
CAC
C
C
sing
1.53
N
N
12
CAK
CAJ
C
C
sing
1.53
N
N
13
CAK
CAL
C
C
sing
1.53
N
N
14
CAJ
CBL
C
C
sing
1.53
N
N
15
CAJ
CAD
C
C
sing
1.51
N
N
16
CAE
CAD
C
C
sing
1.53
N
N
17
CAE
CAF
C
C
sing
1.55
N
N
18
CBL
C49
C
C
sing
1.52
N
N
19
CAD
CAC
C
C
sing
1.55
N
N
20
CAF
CAH
C
C
sing
1.55
N
N
21
CAF
CL
C
CL
sing
1.8
N
N
22
C49
CAB
C
C
sing
1.54
N
N
23
CAC
CAH
C
C
sing
1.52
N
N
24
CAC
CAB
C
C
sing
1.51
N
N
25
CAH
OAI
C
O
sing
1.43
N
N
26
CAL
H1
C
H
sing
1.09
N
N
27
CAL
H2
C
H
sing
1.09
N
N
28
CAK
H4
C
H
sing
1.09
N
N
29
CAJ
H5
C
H
sing
1.09
N
N
30
CBD
H6
C
H
sing
1.09
N
N
31
CBD
H7
C
H
sing
1.09
N
N
32
CBF
H8
C
H
sing
1.08
N
N
33
OBH
H9
O
H
sing
0.97
N
N
34
CBI
H10
C
H
sing
1.08
N
N
35
CBJ
H11
C
H
sing
1.08
N
N
36
CBL
H12
C
H
sing
1.09
N
N
37
C49
H13
C
H
sing
1.09
N
N
38
C49
H14
C
H
sing
1.09
N
N
39
CAB
H15
C
H
sing
1.09
N
N
40
CAB
H16
C
H
sing
1.09
N
N
41
CAD
H17
C
H
sing
1.09
N
N
42
C9
H18
C
H
sing
1.09
N
N
43
C9
H19
C
H
sing
1.09
N
N
44
C9
H20
C
H
sing
1.09
N
N
45
CAH
H21
C
H
sing
1.09
N
N
46
OAI
H22
O
H
sing
0.97
N
N
47
CAF
H23
C
H
sing
1.09
N
N
48
CAE
H24
C
H
sing
1.09
N
N
49
CAE
H25
C
H
sing
1.09
N
N
50
CAL
C1
C
C
sing
1.53
N
N
51
C1
C2
C
C
sing
1.53
N
N
52
C2
C3
C
C
sing
1.53
N
N
53
C3
C4
C
C
sing
1.53
N
N
54
C4
C5
C
C
sing
1.53
N
N
55
C5
C6
C
C
sing
1.53
N
N
56
C6
C7
C
C
sing
1.53
N
N
57
C7
C8
C
C
sing
1.53
N
N
58
C8
C10
C
C
sing
1.53
N
N
59
C10
C11
C
C
sing
1.51
N
N
60
C11
N1
C
N
sing
1.35
N
N
61
C11
O1
C
O
doub
1.21
N
N
62
N1
C13
N
C
sing
1.47
N
N
63
C13
C14
C
C
sing
1.53
N
N
64
C14
C15
C
C
sing
1.53
N
N
65
C15
C16
C
C
sing
1.53
N
N
66
N1
C17
N
C
sing
1.46
N
N
67
C1
H3
C
H
sing
1.09
N
N
68
C1
H26
C
H
sing
1.09
N
N
69
C2
H27
C
H
sing
1.09
N
N
70
C2
H28
C
H
sing
1.09
N
N
71
C3
H29
C
H
sing
1.09
N
N
72
C3
H30
C
H
sing
1.09
N
N
73
C4
H31
C
H
sing
1.09
N
N
74
C4
H32
C
H
sing
1.09
N
N
75
C5
H33
C
H
sing
1.09
N
N
76
C5
H34
C
H
sing
1.09
N
N
77
C6
H35
C
H
sing
1.09
N
N
78
C6
H36
C
H
sing
1.09
N
N
79
C7
H37
C
H
sing
1.09
N
N
80
C7
H38
C
H
sing
1.09
N
N
81
C8
H39
C
H
sing
1.09
N
N
82
C8
H40
C
H
sing
1.09
N
N
83
C10
H41
C
H
sing
1.09
N
N
84
C10
H42
C
H
sing
1.09
N
N
85
C13
H43
C
H
sing
1.09
N
N
86
C13
H44
C
H
sing
1.09
N
N
87
C14
H45
C
H
sing
1.09
N
N
88
C14
H46
C
H
sing
1.09
N
N
89
C15
H47
C
H
sing
1.09
N
N
90
C15
H48
C
H
sing
1.09
N
N
91
C16
H49
C
H
sing
1.09
N
N
92
C16
H50
C
H
sing
1.09
N
N
93
C16
H51
C
H
sing
1.09
N
N
94
C17
H52
C
H
sing
1.09
N
N
95
C17
H53
C
H
sing
1.09
N
N
96
C17
H54
C
H
sing
1.09
N
N