Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : EM9    

Bonds between two atoms of the molecule

Total Number of Bonds: 96


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OBH CBG O C sing 1.36 N N
2 CBG CBF C C doub 1.38 N Y
3 CBG CBI C C sing 1.39 N Y
4 CBF CBE C C sing 1.39 N Y
5 CBI CBJ C C doub 1.38 N Y
6 CBD CBE C C sing 1.51 N N
7 CBD CAK C C sing 1.53 N N
8 CBE CBK C C doub 1.38 N Y
9 CBJ CBK C C sing 1.39 N Y
10 CBK CBL C C sing 1.5 N N
11 C9 CAC C C sing 1.53 N N
12 CAK CAJ C C sing 1.53 N N
13 CAK CAL C C sing 1.53 N N
14 CAJ CBL C C sing 1.53 N N
15 CAJ CAD C C sing 1.51 N N
16 CAE CAD C C sing 1.53 N N
17 CAE CAF C C sing 1.55 N N
18 CBL C49 C C sing 1.52 N N
19 CAD CAC C C sing 1.55 N N
20 CAF CAH C C sing 1.55 N N
21 CAF CL C CL sing 1.8 N N
22 C49 CAB C C sing 1.54 N N
23 CAC CAH C C sing 1.52 N N
24 CAC CAB C C sing 1.51 N N
25 CAH OAI C O sing 1.43 N N
26 CAL H1 C H sing 1.09 N N
27 CAL H2 C H sing 1.09 N N
28 CAK H4 C H sing 1.09 N N
29 CAJ H5 C H sing 1.09 N N
30 CBD H6 C H sing 1.09 N N
31 CBD H7 C H sing 1.09 N N
32 CBF H8 C H sing 1.08 N N
33 OBH H9 O H sing 0.97 N N
34 CBI H10 C H sing 1.08 N N
35 CBJ H11 C H sing 1.08 N N
36 CBL H12 C H sing 1.09 N N
37 C49 H13 C H sing 1.09 N N
38 C49 H14 C H sing 1.09 N N
39 CAB H15 C H sing 1.09 N N
40 CAB H16 C H sing 1.09 N N
41 CAD H17 C H sing 1.09 N N
42 C9 H18 C H sing 1.09 N N
43 C9 H19 C H sing 1.09 N N
44 C9 H20 C H sing 1.09 N N
45 CAH H21 C H sing 1.09 N N
46 OAI H22 O H sing 0.97 N N
47 CAF H23 C H sing 1.09 N N
48 CAE H24 C H sing 1.09 N N
49 CAE H25 C H sing 1.09 N N
50 CAL C1 C C sing 1.53 N N
51 C1 C2 C C sing 1.53 N N
52 C2 C3 C C sing 1.53 N N
53 C3 C4 C C sing 1.53 N N
54 C4 C5 C C sing 1.53 N N
55 C5 C6 C C sing 1.53 N N
56 C6 C7 C C sing 1.53 N N
57 C7 C8 C C sing 1.53 N N
58 C8 C10 C C sing 1.53 N N
59 C10 C11 C C sing 1.51 N N
60 C11 N1 C N sing 1.35 N N
61 C11 O1 C O doub 1.21 N N
62 N1 C13 N C sing 1.47 N N
63 C13 C14 C C sing 1.53 N N
64 C14 C15 C C sing 1.53 N N
65 C15 C16 C C sing 1.53 N N
66 N1 C17 N C sing 1.46 N N
67 C1 H3 C H sing 1.09 N N
68 C1 H26 C H sing 1.09 N N
69 C2 H27 C H sing 1.09 N N
70 C2 H28 C H sing 1.09 N N
71 C3 H29 C H sing 1.09 N N
72 C3 H30 C H sing 1.09 N N
73 C4 H31 C H sing 1.09 N N
74 C4 H32 C H sing 1.09 N N
75 C5 H33 C H sing 1.09 N N
76 C5 H34 C H sing 1.09 N N
77 C6 H35 C H sing 1.09 N N
78 C6 H36 C H sing 1.09 N N
79 C7 H37 C H sing 1.09 N N
80 C7 H38 C H sing 1.09 N N
81 C8 H39 C H sing 1.09 N N
82 C8 H40 C H sing 1.09 N N
83 C10 H41 C H sing 1.09 N N
84 C10 H42 C H sing 1.09 N N
85 C13 H43 C H sing 1.09 N N
86 C13 H44 C H sing 1.09 N N
87 C14 H45 C H sing 1.09 N N
88 C14 H46 C H sing 1.09 N N
89 C15 H47 C H sing 1.09 N N
90 C15 H48 C H sing 1.09 N N
91 C16 H49 C H sing 1.09 N N
92 C16 H50 C H sing 1.09 N N
93 C16 H51 C H sing 1.09 N N
94 C17 H52 C H sing 1.09 N N
95 C17 H53 C H sing 1.09 N N
96 C17 H54 C H sing 1.09 N N