Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : G1U    

Bonds between two atoms of the molecule

Total Number of Bonds: 52


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O10 C09 O C doub 1.21 N N
2 C11 C09 C C sing 1.51 N N
3 C09 C08 C C sing 1.46 N N
4 C08 C03 C C sing 1.47 N Y
5 C08 C06 C C doub 1.38 N Y
6 C02 C03 C C sing 1.51 N N
7 C02 C01 C C sing 1.53 N N
8 C07 C06 C C sing 1.51 N N
9 C03 C04 C C doub 1.36 N Y
10 C06 N05 C N sing 1.35 N Y
11 C04 N05 C N sing 1.37 N Y
12 C04 C12 C C sing 1.48 N N
13 C13 C12 C C doub 1.35 N Y
14 C13 S14 C S sing 1.76 N Y
15 C12 N24 C N sing 1.33 N Y
16 S14 C15 S C sing 1.71 N Y
17 N24 C15 N C doub 1.29 N Y
18 C15 C16 C C sing 1.51 N N
19 C16 N17 C N sing 1.47 N N
20 N17 C18 N C sing 1.47 N N
21 N17 C23 N C sing 1.47 N N
22 C18 C19 C C sing 1.53 N N
23 C23 C22 C C sing 1.53 N N
24 C19 C20 C C sing 1.53 N N
25 C22 C20 C C sing 1.53 N N
26 C20 N21 C N sing 1.47 N N
27 C01 H013 C H sing 1.09 N N
28 C01 H011 C H sing 1.09 N N
29 C01 H012 C H sing 1.09 N N
30 C02 H022 C H sing 1.09 N N
31 C02 H021 C H sing 1.09 N N
32 C07 H071 C H sing 1.09 N N
33 C07 H073 C H sing 1.09 N N
34 C07 H072 C H sing 1.09 N N
35 C11 H111 C H sing 1.09 N N
36 C11 H112 C H sing 1.09 N N
37 C11 H113 C H sing 1.09 N N
38 C13 H131 C H sing 1.08 N N
39 C16 H162 C H sing 1.09 N N
40 C16 H161 C H sing 1.09 N N
41 C18 H181 C H sing 1.09 N N
42 C18 H182 C H sing 1.09 N N
43 C19 H191 C H sing 1.09 N N
44 C19 H192 C H sing 1.09 N N
45 C20 H201 C H sing 1.09 N N
46 C22 H222 C H sing 1.09 N N
47 C22 H221 C H sing 1.09 N N
48 C23 H231 C H sing 1.09 N N
49 C23 H232 C H sing 1.09 N N
50 N05 H051 N H sing 0.97 N N
51 N21 H212 N H sing 1.01 N N
52 N21 H211 N H sing 1.01 N N