Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : G1Y    

Bonds between two atoms of the molecule

Total Number of Bonds: 46


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C20 C19 C C sing 1.54 N N
2 C20 C21 C C sing 1.55 N N
3 C19 N18 C N sing 1.47 N N
4 C21 C22 C C sing 1.52 N N
5 N18 C22 N C sing 1.35 N Y
6 N18 C17 N C sing 1.37 N Y
7 C22 N23 C N doub 1.31 N Y
8 C17 C16 C C doub 1.36 N Y
9 N23 C16 N C sing 1.35 N Y
10 C16 C15 C C sing 1.48 N N
11 C14 C15 C C doub 1.39 N Y
12 C14 C13 C C sing 1.38 N Y
13 C15 C24 C C sing 1.39 N Y
14 C13 C12 C C doub 1.38 N Y
15 C24 C11 C C doub 1.38 N Y
16 C12 C11 C C sing 1.38 N Y
17 C11 C10 C C sing 1.51 N N
18 C10 N09 C N sing 1.46 N N
19 O01 C02 O C doub 1.22 N N
20 C02 N09 C N sing 1.35 N N
21 C02 C03 C C sing 1.48 N N
22 C03 C08 C C doub 1.4 N Y
23 C03 C04 C C sing 1.4 N Y
24 C08 C07 C C sing 1.38 N Y
25 C04 C05 C C doub 1.38 N Y
26 C07 C06 C C doub 1.38 N Y
27 C05 C06 C C sing 1.38 N Y
28 C04 H1 C H sing 1.08 N N
29 C05 H2 C H sing 1.08 N N
30 C06 H3 C H sing 1.08 N N
31 C07 H4 C H sing 1.08 N N
32 C08 H5 C H sing 1.08 N N
33 N09 H6 N H sing 0.97 N N
34 C10 H7 C H sing 1.09 N N
35 C10 H8 C H sing 1.09 N N
36 C12 H9 C H sing 1.08 N N
37 C13 H10 C H sing 1.08 N N
38 C14 H11 C H sing 1.08 N N
39 C17 H12 C H sing 1.08 N N
40 C19 H13 C H sing 1.09 N N
41 C20 H14 C H sing 1.09 N N
42 C21 H15 C H sing 1.09 N N
43 C24 H17 C H sing 1.08 N N
44 C19 H18 C H sing 1.09 N N
45 C20 H19 C H sing 1.09 N N
46 C21 H20 C H sing 1.09 N N